Detailed information of BRAKERYMEP00000034368.1 in Astreopora myriophthalma

Genomic Location: :...
NR annotation: XP_029214184.2, AP-5 complex subunit beta-1-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q0IJ20RING finger protein 145 OS=Xenopus tropicalis OX=8364 GN=rnf145 PE=2 SV=1
Q5SWK7RING finger protein 145 OS=Mus musculus OX=10090 GN=Rnf145 PE=1 SV=1
Q96MT1RING finger protein 145 OS=Homo sapiens OX=9606 GN=RNF145 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21589AP5B1_barrelAP-5 complex subunit beta-1, beta-barrelDomainInterproscan
PF13705TRC8_NTRC8 N-terminal domainDomainInterproscan
PF21588AP5B1_middleAP5B1, middle domainRepeatInterproscan
PF21590AP5B1_CAP5B1, C-terminalDomainInterproscan
PF13639zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048980DomainAP-5 complex subunit beta-1, beta-barrel domainInterproscan
IPR025754DomainTRC8-like, N-terminal domainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR048979DomainAP5B1, middle domainInterproscan
IPR048981DomainAP5B1, C-terminal domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR038741FamilyAP-5 complex subunit beta-1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR34033AP-5 COMPLEX SUBUNIT BETA-1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005765Cellular Componentlysosomal membraneInterproscan
GO:0016197Biological Processendosomal transportInterproscan
GO:0030119Cellular ComponentAP-type membrane coat adaptor complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23789RNF145; E3 ubiquitin-protein ligase RNF145EC:2.3.2.27
Ubiquitin systemko04121deepkoala

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