Gene detail

Detailed information of BRAKERYMEP00000034432.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029214183.2, eukaryotic translation initiation factor 3 subunit A-like [Acropora millepora]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000034432

ATGAGTGTTCAACAGCACATTATGCCACAGTTGCAAGATCTCTATCACTGCCTTGAGAGGGAATTCTCTCCTTTAAAGCTCTGTGCTCGGGTCAACACAATCTTTGAGTTCTTGCAGGCAAATGAAGAATTGGACCTTTCCCAATATGTCAAGCCTCTGAAGGAGGTGTCTATTGTGCGTCTCCTGAAACAGGTGTCTCAAGTTTACCAGACAATGGAGTTTTCCAGACTTAGGGCCTTGGTGCCATTTGCCACGGAGTTCCAACTAGAACGAGCTATTGTGGATGTTGCTCTGGAAAATGAGCTGCAGGTGCGTATTGACCACAAAACCAAGGCAATAAGTTTTGGACTTGACCTTCATGTTGCACATAAGGAAGAGGTTCCAGAAGGCCCTTACTTGCAGTCTATGCCTTCAGAACGCCTCAGAAATCAGTTGACACTGATGTCGTCAGCATTGCACAAAGCCATCAATAAAATTCACCCTGAGACCATTAAGCAAAAATGCGAGGATGAACAGAAGAAGATAGTGCAGACTTGTTTGCGAACTTCCAAAAAGGAACACAGGCAAATGTTGGAAAGGAAAGCTGTGATTGAGGCTCGCAAAGAGTACTTGGAATCTCTGCATGTTAAACGGGAACAACAAGAACAGAAAATGTTACAGTTACAACAAAAGGAGAGTTTACAAGCCGAGAAAAAGCGACTTGACGAAGAGAGAAGGAAGCGGGAGGTGATGCGCCGCAAGCAGGAGTTGCAGGAGATTGAAAAGAAACAGGCCATGGACAAGATCGCTGCACTGAAGAAGACTTCCGTGGGTGCTAAAGCTCTGAAAGATCTCACTGAAGAGGAGATAGAAGCCATGGATGCAGATGATATCTTGGCCAGACAAGTTGAACAGCTCGATAAAGAGAAGAGAGAACTGCAGATAAGGCTCAAGACACAAGAGAAGAAGATGGATTACCTTGCGAGAGCCATGCGTGTGGAAGAGATTCCTCTGTTGAACAAACAGTACGAAGAACAGCTTGTGATGGATAAACAATTTTGGGAAGAACAAGAAGATGAGAGGATTAATAAAGCCGTTGCAGAGCACAAGAAGTTGGTTGATACCAGCGGTCGACTGCAGCGTATGCTTCCGGACAAAGATGCTTTTGTCGAGAATCTCGACAAGGCGCGCCGGGCAGCTCATGAGgAAAGAATGAAGGAATTCCAAACGCGTTTGGATGAAGCTCGGAAGAAGCGCTTGGAGGAACGACGCAAGGAACGCATTTTAGAGAGAAAGGTCCAGCGGAGGATTGAAAAGGAAGagagggaaagaaaagaaaaagaggagaGAGAAAAGAGAGAGCGCGAAGAGGTGGAGGAAGCTGCGCGCAAGCTAAAAGAGGAGAAGGAGCGAGAGTACCGTGAGAGAATTGCGAAGCTCGATGAAATGGAACGGAAGaagaaggaaagagaaaaggaGATTGAAGAGAGGGACCGGGTTCGAGATCGAGATCGAGATGTACCGTTGTACCGTGACGGCGATGGAGAAAGGGACCGAGACCAGTGGGGGCCACCCCGCAAGGAAATAAGGGAGGAGAAAGAGTGGAGAGATGAACCAAGGGGAGGCCCGCCATTGCGACGAGATGATCGTGACGGGCAGGTGGGATGGCGCCGAGATGAACCGCCTCGTGAGCGTGACCAGGAATACGATGGGCCGCCGCGTGATCGCGATTCTGGCAGCGGATTGCGCCGTGGTGCAGGCGATTTCCGAGATGACCGTGGCCGCGACGATCGGCCGCGTGACTGGGTACCCGGAGCCGGTAGACGGGATGAACGTGACAAAGAGGGACCTCATGACGAGGGAAACTCTTGGAGGAGGCCTGGTGACAGGGATGGACCACCAAGACGCGACATGGACCGTGGGCGAATGGATGATCGCGGACGTATGGATGATCGAAGAATGGATGATCGTGGGCGTATGGATGACCGTAGGATTGATGATCGGAGAATGGATGATCGTGGACGAGTGGATGACCGGAGAATGGATGATCGGAGAATGGATGATCGTGGACGAATGGATGATCGGAGAATGGATGATCGGAGAATGGAAGATCGTGGACGAATGGATGATCGGAGAATGGATGACCGTGGACGAATGGATGATCGGAGAATGGATGACCGTGGACGAATGGATGATCGTAGAATGGCCGATCGAAGAATGGATGACCGTGGACGAATGGATGATCGCGGAAGGATGGATGATCGTGGAAGTGGTTGGAGAAGGGATGACCGTGATCGTCCTCCACTGAGTGGATggcgtgatcgtgatcgtgatcgtgatcgtgatcgtgatcgtgacCGTCCTCCAGCAAGCACATGGCGCGGTCGAGATGAGCGTGGGCGTGAGGAACGTGACCGGCCAAGTGGTTGGCGTGACGATCGTGATAGGCTAGGTGGCTGGGGAAGGCGTGATCGGGATGAACGTGACCGTCCTCCGGGAGATGGATGGCGCGGTGGTGATCGTGGAAATAGGGAACGCGAGGATCGCTATCGTGGTGATCGCGATGGTGACCGCTTCAGAGGTGAGCGTGACCGAGACGATCGTTATCGCGATGACCGTGACCGTCCTGGCTGGAGGAGCGAGCGCTCGGATGATCGTGGCGGCGATCGTGACCGTGACGGGTGGAGAAGAGGAGGGGATGATCCCGGCCGTGACCAGTGGAGACGGGAGCCCCCACCCGCGCGCACTGAAGGAAAGTCCTGGTCTGCGGCCCGTCGTGGTCGCGAACGTCCCCCCGCGGAGCAGTCTGATCCGGATGGTTGGACTACAGTTCAGTACAAGTAA

Transcript

BRAKERYMET00000034432

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7SK48	Eukaryotic translation initiation factor 3 subunit A OS=Nematostella vectensis OX=45351 GN=v1g190699 PE=3 SV=2
P23116	Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5
Q14152	Eukaryotic translation initiation factor 3 subunit A OS=Homo sapiens OX=9606 GN=EIF3A PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004042 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01399 all species →	PCI	PCI domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000717 all species →	Domain	Proteasome component (PCI) domain	Interproscan
IPR027512 all species →	Family	Eukaryotic translation initiation factor 3 subunit A	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14005 all species →	EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0001732 all species →	Biological Process	formation of cytoplasmic translation initiation complex	Interproscan
GO:0002188 all species →	Biological Process	translation reinitiation	Interproscan
GO:0003729 all species →	Molecular Function	mRNA binding	Interproscan
GO:0003743 all species →	Molecular Function	translation initiation factor activity	Interproscan
GO:0005852 all species →	Cellular Component	eukaryotic translation initiation factor 3 complex	Interproscan
GO:0043614 all species →	Cellular Component	multi-eIF complex	Interproscan
GO:0071540 all species →	Cellular Component	eukaryotic translation initiation factor 3 complex, eIF3e	Interproscan
GO:0071541 all species →	Cellular Component	eukaryotic translation initiation factor 3 complex, eIF3m	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000034432.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.