Gene detail

Detailed information of BRAKERYMEP00000034483.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_044168973.1, ubiquitin-like domain-containing CTD phosphatase 1 isoform X1 [Acropora millepora]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6DI37	Ubiquitin-like domain-containing CTD phosphatase 1 OS=Danio rerio OX=7955 GN=ublcp1 PE=2 SV=1
Q28EX9	Ubiquitin-like domain-containing CTD phosphatase 1 OS=Xenopus tropicalis OX=8364 GN=ublcp1 PE=2 SV=1
Q5ZJJ8	Ubiquitin-like domain-containing CTD phosphatase 1 OS=Gallus gallus OX=9031 GN=UBLCP1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005971 (this species only)
Ubiquitin family	ULD\|UFD/UBQ\|UBQ_Other · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00240 all species →	ubiquitin	Ubiquitin family	Domain	Interproscan
PF03031 all species →	NIF	NLI interacting factor-like phosphatase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051658 all species →	Family	Ubiquitin-like domain-containing CTD phosphatase 1	Interproscan
IPR000626 all species →	Domain	Ubiquitin-like domain	Interproscan
IPR023214 all species →	Homologous_superfamily	HAD superfamily	Interproscan
IPR004274 all species →	Domain	FCP1 homology domain	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR036412 all species →	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR011943 all species →	Domain	HAD-superfamily hydrolase, subfamily IIID	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48405 all species →	UBIQUITIN-LIKE DOMAIN-CONTAINING CTD PHOSPHATASE 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004722 all species →	Molecular Function	protein serine/threonine phosphatase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006470 all species →	Biological Process	protein dephosphorylation	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004721 all species →	Molecular Function	phosphoprotein phosphatase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17618	UBLCP1; ubiquitin-like domain-containing CTD phosphatase 1	EC:3.1.3.16	Protein phosphatases and associated proteins	ko01009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.