Gene detail

Detailed information of BRAKERYMEP00000034536.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029209575.2, uncharacterized protein LOC114973339 isoform X1 [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000034536

ATGAAGGTTGAACGTTCACGTGAAGGAAGGAGATTTCGTCGTTGCCACGACTTGGTGGTTACTTTACCCAACGAAGAAAGCGGAGAGTCTCGCCTGAAACCGCCAGTCATTTCAAGCCATCCCCGGAAGATCGTGTTGAGCCAAAATAAAACGGGATCCACTGATCTCAATAAAGTAACCGTCAAGTCGCTAGATGAAATTAAACGAGAGAAAGAACAGCGCCAAAAAGAGTCTACAGCAACATCTTTGCAGTCGGCGAAGTCTGCAGCTCAGATTCCAAATGGCGGCAAAGCGGACGTTTTGGGTAACAGCAGTAAACTATTGACAAACACTGGACCAGGTGTTCGTGCCCCACTAATTGCAAGACGTGTAGAGACCACATCCACGGCACATGTGAGCGGAGTAAATACCAACTTGCCACTGAAAGAGTTGACAATTCCTCTCAAAGCACTGCCCTCTAACTGCAAGATAATGAATCGCAAATCAGAACTGCTTGCATCATCAAGTCCACCAGAACTACGTGAAGTGTCCATGGATATGGACAGCCACTTGCCAGAACAAGACTTTGATTATTTGGATGAAGATGAGGATAGTAGTGATGTCACGGATGGTCTGGATGAAGATTTTTTGCTGGGGGATGATGAAGAGATGCACAGATCTCACAGTGGCCAGGATAGTAACGACTTTGAGAGTCTCCACTTTGATGGAATGTCTGGCTATACAGATACTACATTTAGTGAACCTGAAGAtgatgaaatttctcttcaccCTGACGACTCGCTGTTTGACGAAGAAGATGAGTCTACAGGAAACAATGAAAGACAGCATCCAAGATCACTAGGAAGGCGATCAGGGAGTGAGCCCAGAGAGTTCAGAGCTAAATTGGGTGACAAGCAGAAGCATGTCCAAGAAAGCCCGAGTAGTCCAGTGAAAACAGCTGCTGATGAACCAGAAACTGAAAGACAAGAAACAGAGGTTGGAAGCAAAGAAACTGGGATAGTTGAAGACCGTGTTCAGAGAAGGTCAGATAACAGAgaaggaaatcaaagaaatcattTTTACAGGACATCAAAGAGAAATCAGGATAAAAGGGGCAGACCTGGAGTAGACAGACGGGCTGCTGGGTGGAAAAATGGCAGACTGCAATTTGGACGTGGCGTCTCCAGAAGAGGTGCACCTGTTTCAAGgaatgacaaaaggaaaggaagTGGACTTAAGGTTGCTTCAAAATATGGGAGATTGCTGGTCCCTTTTGGTAGTGGTGATGGTCTCTTGCCCCTTCCCAGCACGTCGAGCGTGCCAGTAGACTTCATGAACAATTTACAAGCAGCATCAGCAGCTACGATGTTAAACATAGCAATCAAAAAAAATATTCAGGATACTGTGGAAATGTTAACTAATCCGCCCCCAGTTCCTGGTGAAACAGTGGCCAGGTTTGAAGAAAGCTTGAGGCAGCCATCTGTTCCCCATGTACCACAAGAGGCTTGGGGGAAGCAACCGTTTAAGAGACAGCAGAGCAACTTGCAAGGCAGCAAGAACGCAGGACCGCCTGGGGCTTTCTCAAAAACTAAAGCCCCAGCGGCGGTACGTTCCCAGCAGAATGTGCAAATGATCCATACCAGACCAAAGTGGTTGCAGAAGACATTCAGTGATCCTGACACAATTGAACAAGGAACAGTGAATCAGGTCCTCCAAGGGAATTCTGAAGGAGCTGTGCCACCACATGAAACTGCTAAAtcagatgaaaatgtcttgttGGCAAGGGGCAGACTCAGGAATTTAGAAAGGACAGGTTCTCAAAATGATACAGACAgccaacttatccaccactctCCTTCTTCCATCCTTGACTCTGACGTAAAGAGATcaccaagaaaacgaaaaagtCCCTTTCGAAATGAAGACGAGGCACATGGAGGCAAGATAGCAGTTGGAACAAACCATGAAGAAGTGCCTCGGCCTAACCATGCAAGAACACAGAAAACATACCCCAAACCTTTATGTCCTCAGCAGTTACAAACTGGGAAATGTCTTGATAGCCGTTGCCAGTGCTGGCATTTGCCAAAGCCTGAACTTGAGGAGcatCAAAGATTGCAACAACCAGAACAGAGCCAAGAGCATTTAACGACAGGCCAGTCAGCAGAACAGCCAGCTCTGATTCAGCAGCAGCAGAAGAAAGaGGATGTCACTGGAGTTTCATATGATGTAGTCAATGCACTGTTAAAGGATCACAAATTAAGTGTTGCCTGGCAAATGATTGAGAGACTTCGCAGAATGAATCATCCCCCAGAGTTAAGCATTCTTCAGCATGTTCTGTATTTATGCAGTAAGCATAAGGAAGAACCTGATGTTGCTGCCCAGGTTGCATGCAAAGCATTTGATATGATTGGTGGAATGGTCAAACACCACAATAGGCACAATTATGAGACCTTGATCAAGGCATTGTGTCACTCGGGACAGTATATAAGAGCCTATGAAATGCTTGATGTAATGAAAAAGAACAGTCATTCACCTACGTACGAAGTGTTCCTGGATTTGATCCAAGCATCGGAAAAAGATCCTGACTGGGCATTCAATCTTTTGGATGAAATCAAGCAGGCTGGAGTGTTCAGGTCAAAGATTTGTAGTGATCTGATACTCCTTGGATGTAGCAGTGGAGAAATGTTTGTTGAGAGGACTGTCTTGCTATTTCAGGAAGCCCTGGAGAAGAATGTTCAACTAACACCTGATGCAATTTCAACAGTGCTCTTCTTCTTGTTCGAAACAAACCACTGGGAGAAAATCATACCAATCTTACCATCAATCCCAGACAAAGTACCCCTTGAGATCTTGAAGGCTGCATTGTTAAATGCCTTGCAGAGGGCAGACTGGACCGATATGGTCATCACAGCACTTGCTATGAGTTCAGCTGAAAAATTGACTGAATTGGAAGCTGATGTGTGGAATGGGTTTCTCAGAAACTGTTGTCAAGGACAAAGTGACAATGCGTCCTTTGCCCAGAGAATTTATTCTTTGATGCAACAGAATGGAATTCCTTTGTTGCCTGAGGCCATCAATGATTACATGGCTCTTCAAAGCCAGAAAAACTGCACAGCAGCCTTTGAGCTATTTGTTGCAGTTAGTGAGGGACCACAAGGTGTTGAGCAACCCCAGACTCTGGAAGGTGGTCTTAATGCCCTTTCAGTTGCCCTGGACAATGGTGGGTTAGGCGCTGATATGTTGCGTGTGGTTTACTTCATGCTGGAACACCAGATTAAACCTGTTGATAGTGTTTTGCAGTCAGGTGTGAAGCATCTTGACAAAGAGGAGAATTTTAAAGGAGTGTATCAATTTTTCAAGCAGCTTGAAACAGCTGAAATTGTGCCACCATTTTCAGTGTACAAGGCAATGATATCTTCTTTGGAAAAATGGGGTGAAAATCCAACTGCCTCTTTTGAACCCTATGTCAGCATGCGACGGGCTTACCCTGCTGGTGAGCCATCTGAAACTGGCACGAATAACGAAGATGCTGTTGAGAGtgagaaaaaagaaaaacgtggaAAACGAGTGTGCAAATACTATTTCACAAAACTGGGCTGTTACAGCGGTGAAAAATGCAACTTCCTACATCCAGAGGGACCCAAACACTTGGTTAATTCCTCACAAGATGGCTCTCCACCTCTTCCAAGTAATACTTACAAGACACCTGCCATGAAAGTGGCTCAAGACTCTGGGCTTACTTCTGAAGGAAGGGCTACAAGGAGCACAACAGATGGGACACCGGTAATCGCCCAAGCTCATGGCACTCAACCTGTTTACAGTGGAGTTCCTGCCGTTGCCAGTCAAGTTGCACAGCCATTGGAAGGTGATCAAATGAGCCATCTGGGAACTGAAACAGTACCGTTTGCCTTACAAAAAGCCAGTGGGTTACCTGTCCTTTTCACAGAGACAAGCTCCAGAATTCCTAAGGACGAACCTCACATCAGAGTGGATGATGGGGTCAGTTGTGACTATACTGTTGGAAGTATAAATCCTCAGAAGCAAGGAATCTGCAGGTACTTTGCCACTCCGCGTGGTTGTCGTTTTGGTGATCAGTGTCAGTTTGTCCATAATACCAACACAGTGTCCATGCCATCAAATTCCAAACCTCCTTTATCTGTGGAAGTTAGCGCTGAAACCTTAAAGAACAATGGGAGATATCGACTGTTAGGGGTTGTGTTGGAGATGTTAGGCTTCGTGCAAATCCAAAGCTATGTTGCTATTTTTCAAAGAGggacgtttttgttttcctcaacAGATGTCCCATCAGTTGGCAACAGGAGATTAGCAGCTCCTGATAGCCATTCAGGAACTGCCTTTGTGTTGAGAGGTGCACATTTGCCGTCTGGTCAGACTGCTGGAATCACTCCATTTGGGCATGTCAGCTCTTTCCAAAACACTTCTTTTATGGCTGGGCCCATTTCTTCAGTCTCGCGGATGCCTTTTTCCAAACTGCCCTCAGTGGGTTCTCATCATTTCCAGCTAGCAGGTCCCAATCCTTTTAGGGGTAAAAATCCATTTTCACCTACTGTGCCTGGAAGAACTCGAAGCATGGAAGGGTTTGGTGAGCCCAAAGAAATGGAACAAATGCGTCAAGCACATTCTGCACCCATTGTATCGCAGATGCCAGGCGAAAGTTTCTTTTATTACCCTTCAAAGACTAATCTTCAGTTTTATTTGCCAAGAATCAAGCATGCCAGTCAGAACAAGAGCTGGGAGGATCTTGGTCTCATTTACATCACAATGAGGAATGCAGATGTGGAAATTGACTCTTCAGTGCTGAAAGCATTTTACCAATCGTTTGAAACCTTCTGCCCAGACACAGTTGGAAgcagttttgagaaatttgcCTCAAAGGTTCAGGTTCAAGTGGTTGGAATGAAAGATGCAGATCCTGAACGTAGTCCGAGTTCGCTGCTAGATGCTGGCGATAAGTGCTTTTTTGGTCAGTTAGGTGTGGCTCTGATGTACTTTTGTTACCAAAAGAAGTCTTTTTCTCAAGGGTATAATGTGCTGCATGTCCTTCATAACTTCAGCATCAATTACTCTTTGTACACTGGTGAATTTGGAATTCAGCAAAGGCCACTGACAACAACCGAAGTATCATTGACTGCTGCTGACATTTGTCTGCATCTGGATAACCCTGCCAATACCAGTGCTCTAGAGGTACTTCGTGGAACAAACTATGCACTCCCAGTTCAAAGTAGTGGAGCATTATTATCACTGGAGGAAGCTGCATGGAGACGACATGTTGTGCAAACATTGTGCCAGAGTTTTATGAGTGACAACCAATTTGATCTTGTGTATGAACTACTTACTGAAGTTGGAGACATTGATGTGTTTGGTAGAAGACAGTTGAAGGCTCTGTACAATGAACTCCTTGTCAATTTGATTAACAACAATGAACTTGATGTTGCTGGAGACGTTCTAAAATCTATGGAGACAAACCTTCTTTCCAGGGATGCAGAAACTGTTCGAGCCTTTGTGAAGGGCTTTGGAGAGGCGGGCCGTATTGCACAAGCCAAACAACACTTCATGAGTGGCTGCATATCGGGTGTGTACCCTATCTCCTTCAATCAAGATAATCCATGGACTGTGGTTATTGGAACCAGCTTTTCACCACTTGAAAGCCAGTTGTTCCTTGAAAAGCACTTGCAGCATTTGTATCATTATATTGAGGAACTTGCTAAGAAGTCTGGTGATGGTGTATTAGATGACAACTATCACAAACCTCTTACAGTTGTTATTGGGTCTGATGAACTCCCAAATTcaaataacaaatatgaaatcaTTCGCTGTGTGCGGGAAATGCTTTACACCGTGCTGACCGATGACTTCAACCCTCCTCTTTCATGTCAGCCACAAAGTGATGAGGAGGTGACAGTAGATGCCCTAAGTCTGAAAAGATGGTTTTGTGCAAATGCTGCTTCTGGACGCTCCAAGCAGGCTGGTTTTCCATTAACCACTTTGTCACAGAAGGCCACAATATTGCATCCGTATCTCCAACCAGGTATGACTAATTTAGGGGCCTCAGACAGTCAGGAGGGAGCCAGTCGCAAAGTTTGTGTCGTTTCTGAAGGAGGTGTGGCGCCATGGCAAGGTCAAAAGCAAACTCGGAATTTGAGAATAATGAGCCATCATGGACAGGGTGGCAGGGCTCGACCGATGTCTTTCAACAGGTATGACTAA

Transcript

BRAKERYMET00000034536

Protein

BRAKERYMEP00000034536.1

MKVERSREGRRFRRCHDLVVTLPNEESGESRLKPPVISSHPRKIVLSQNKTGSTDLNKVTVKSLDEIKREKEQRQKESTATSLQSAKSAAQIPNGGKADVLGNSSKLLTNTGPGVRAPLIARRVETTSTAHVSGVNTNLPLKELTIPLKALPSNCKIMNRKSELLASSSPPELREVSMDMDSHLPEQDFDYLDEDEDSSDVTDGLDEDFLLGDDEEMHRSHSGQDSNDFESLHFDGMSGYTDTTFSEPEDDEISLHPDDSLFDEEDESTGNNERQHPRSLGRRSGSEPREFRAKLGDKQKHVQESPSSPVKTAADEPETERQETEVGSKETGIVEDRVQRRSDNREGNQRNHFYRTSKRNQDKRGRPGVDRRAAGWKNGRLQFGRGVSRRGAPVSRNDKRKGSGLKVASKYGRLLVPFGSGDGLLPLPSTSSVPVDFMNNLQAASAATMLNIAIKKNIQDTVEMLTNPPPVPGETVARFEESLRQPSVPHVPQEAWGKQPFKRQQSNLQGSKNAGPPGAFSKTKAPAAVRSQQNVQMIHTRPKWLQKTFSDPDTIEQGTVNQVLQGNSEGAVPPHETAKSDENVLLARGRLRNLERTGSQNDTDSQLIHHSPSSILDSDVKRSPRKRKSPFRNEDEAHGGKIAVGTNHEEVPRPNHARTQKTYPKPLCPQQLQTGKCLDSRCQCWHLPKPELEEHQRLQQPEQSQEHLTTGQSAEQPALIQQQQKKEDVTGVSYDVVNALLKDHKLSVAWQMIERLRRMNHPPELSILQHVLYLCSKHKEEPDVAAQVACKAFDMIGGMVKHHNRHNYETLIKALCHSGQYIRAYEMLDVMKKNSHSPTYEVFLDLIQASEKDPDWAFNLLDEIKQAGVFRSKICSDLILLGCSSGEMFVERTVLLFQEALEKNVQLTPDAISTVLFFLFETNHWEKIIPILPSIPDKVPLEILKAALLNALQRADWTDMVITALAMSSAEKLTELEADVWNGFLRNCCQGQSDNASFAQRIYSLMQQNGIPLLPEAINDYMALQSQKNCTAAFELFVAVSEGPQGVEQPQTLEGGLNALSVALDNGGLGADMLRVVYFMLEHQIKPVDSVLQSGVKHLDKEENFKGVYQFFKQLETAEIVPPFSVYKAMISSLEKWGENPTASFEPYVSMRRAYPAGEPSETGTNNEDAVESEKKEKRGKRVCKYYFTKLGCYSGEKCNFLHPEGPKHLVNSSQDGSPPLPSNTYKTPAMKVAQDSGLTSEGRATRSTTDGTPVIAQAHGTQPVYSGVPAVASQVAQPLEGDQMSHLGTETVPFALQKASGLPVLFTETSSRIPKDEPHIRVDDGVSCDYTVGSINPQKQGICRYFATPRGCRFGDQCQFVHNTNTVSMPSNSKPPLSVEVSAETLKNNGRYRLLGVVLEMLGFVQIQSYVAIFQRGTFLFSSTDVPSVGNRRLAAPDSHSGTAFVLRGAHLPSGQTAGITPFGHVSSFQNTSFMAGPISSVSRMPFSKLPSVGSHHFQLAGPNPFRGKNPFSPTVPGRTRSMEGFGEPKEMEQMRQAHSAPIVSQMPGESFFYYPSKTNLQFYLPRIKHASQNKSWEDLGLIYITMRNADVEIDSSVLKAFYQSFETFCPDTVGSSFEKFASKVQVQVVGMKDADPERSPSSLLDAGDKCFFGQLGVALMYFCYQKKSFSQGYNVLHVLHNFSINYSLYTGEFGIQQRPLTTTEVSLTAADICLHLDNPANTSALEVLRGTNYALPVQSSGALLSLEEAAWRRHVVQTLCQSFMSDNQFDLVYELLTEVGDIDVFGRRQLKALYNELLVNLINNNELDVAGDVLKSMETNLLSRDAETVRAFVKGFGEAGRIAQAKQHFMSGCISGVYPISFNQDNPWTVVIGTSFSPLESQLFLEKHLQHLYHYIEELAKKSGDGVLDDNYHKPLTVVIGSDELPNSNNKYEIIRCVREMLYTVLTDDFNPPLSCQPQSDEEVTVDALSLKRWFCANAASGRSKQAGFPLTTLSQKATILHPYLQPGMTNLGASDSQEGASRKVCVVSEGGVAPWQGQKQTRNLRIMSHHGQGGRARPMSFNRYD

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006646 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01535 all species →	PPR	PPR repeat	Repeat	Interproscan
PF14669 all species →	Asp_Glu_race_2	Putative aspartate racemase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002885 all species →	Repeat	Pentatricopeptide repeat	Interproscan
IPR000571 all species →	Domain	Zinc finger, CCCH-type	Interproscan
IPR029435 all species →	Domain	Protein TOPAZ1 domain	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR036855 all species →	Homologous_superfamily	Zinc finger, CCCH-type superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47938 all species →	RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003729 all species →	Molecular Function	mRNA binding	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000034536.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.