Detailed information of BRAKERYMEP00000034627.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: CAH3113438.1, unnamed protein product [Porites lobata]
Species abbreviation AMYRI · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9NRC6Spectrin beta chain, non-erythrocytic 5 OS=Homo sapiens OX=9606 GN=SPTBN5 PE=1 SV=2
Q13813Spectrin alpha chain, non-erythrocytic 1 OS=Homo sapiens OX=9606 GN=SPTAN1 PE=1 SV=3
P16546Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003141 (this species only)
Ubiquitin familyUBD|Other|SH3 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00018
all species →
SH3_1SH3 domainDomainInterproscan
PF00435
all species →
SpectrinSpectrin repeatDomainInterproscan
PF00307
all species →
CHCalponin homology (CH) domainDomainInterproscan
PF15410
all species →
PH_9Pleckstrin homology domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018159
all species →
RepeatSpectrin/alpha-actininInterproscan
IPR001452
all species →
DomainSH3 domainInterproscan
IPR001849
all species →
DomainPleckstrin homology domainInterproscan
IPR036028
all species →
Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR036872
all species →
Homologous_superfamilyCH domain superfamilyInterproscan
IPR001715
all species →
DomainCalponin homology domainInterproscan
IPR002017
all species →
RepeatSpectrin repeatInterproscan
IPR001589
all species →
Conserved_siteActinin-type actin-binding domain, conserved siteInterproscan
IPR001605
all species →
DomainPleckstrin homology domain, spectrin-typeInterproscan
IPR011993
all species →
Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR041681
all species →
DomainPleckstrin homology domain 9Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11915
all species →
SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005543
all species →
Molecular Functionphospholipid bindingInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0030036
all species →
Biological Processactin cytoskeleton organizationInterproscan
GO:0030054
all species →
Cellular Componentcell junctionInterproscan
GO:0030864
all species →
Cellular Componentcortical actin cytoskeletonInterproscan
GO:0042995
all species →
Cellular Componentcell projectionInterproscan
GO:0051015
all species →
Molecular Functionactin filament bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06115SPTBN1_4_5; spectrin beta, non-erythrocytic 1/4/5-Cytoskeleton proteinsko04812deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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