Gene detail

Detailed information of BRAKERYMEP00000034936.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_037774663.1, uncharacterized protein LOC119571433, partial [Penaeus monodon]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000034936

ATGCCTTTACAATATCCACATTTGTTTACAGGAAGCCGGCAACCTTGGCGCAGGATACTCTTGTACGGACCACCAGGAACAGGAAAGACAAGACTGGCCCAAGCAGTGGCATCAGAGATTAACTCAGTCTTCTACAGTGTCTCCAGCTGGGTGGGAGAGAGTGAAAAGCTTATCAAAGAGCTTTTCGAGAATGCTAGAAGCCAAAAAGGTCAGTCGGTGGTATTTATTGATGAGATTGACAGTATCTGTAGAAAGAGGAGCATGCGAGAGGAAGAATACACAAGACGAATCAAGACTGAATTGCTTAAACAGatgGAAGGAGCTGATCATAACAAATCTCTTCAACATTTTATACTTTTATGTGCTACTAACTGTCCCTGGGAACTGGACACAGCTTTTCTGAGAAGATTTCAGAAACGCATTTACATTCCTCTTCCAGACAATAAGGCGAGAATCAAACTGATAGAGATGCACTTAACAGGTACACCATCTTCACTATCAGCTGAAGACTGGTGCACACTGGGTCAAAGAACAAAGGGTTTCTCCGGTAGTGATTTGTCTAACTGTACCTCAGATGCTATGTTTGAACCATTGCGTGAATTAGAGGCTAACACTCATTGGAAACTTAATGAAGaaatgttCTATGGGCCCTGTTCAGAAACTGATAAGgattgtttacattcatctttaATCAATCTTCCATCCAAAAAGGTTGATGACTCCAGGAAAACAGCCATCATCAACTGTAAACTCAAGAGGCTCAACCTTGACATCGCTGCACTGCAGGAGACCAGACTCCCTTCAAACGGCAGCCTCAGAGAACAAGACTACACATTCTTTTGGCAGGGAAAGGAACCACAGAAACCAAGACTGCATGGCGTGGGCCTCGCAGTGGGAAACTCTCTATTGTCTGCTGTTGAGCCGGCATCCAGTGGCACAGCCCACATCCTCTCTCTTCACCTTTCAACCTCCTCGGGCCCCGTGAATGTCCTGAGTGTCCACGCTCCCACTCTCTGCTCATCAGCTGAGACCAATGATGAGTTCTACGAGGAGCTTGAGTCCACCATCAGTGAGTTTCCCACCACAGAACACCTCTTTCTGCTTGGGGATTTCAATGCCCGAGTGGTATCCGACTACAATTCCTTGCCCAGCTGCATTGGGCACTTCTGTGTTGGCAAGCTCAATGAAAACGGGCAGAGGCTTCTAGAGCTATGCTCCTACCATGACCTCTGCATAACCAACATGTTCTTCTCCACCAAGCCTCACCACAGGGTATCCTGGCAGCACCCCAGATCCTGCCACTGGCACCAGCTGGATCTCATCATCACCCAAAGACCATCCCTGAACTGCATCCTCATTACTTGCAGTTTCCACAGTCCTGACTGTGACACTGACCACTCTCTGGTCAGTAGCAAGGTGTGTCTTCAACCCAAGCGCATCCACTGCTCGAAGCAGAAAGGATGCCCCTGCATCAACACAGCCAGGACTTCAATCCCAGACCTGTATGAGTGCTTTGCCAACTCTATCGAGGAAGCCCCAAGGGACTGCCCCACAGGCAATGCCAAAGAGAGGTGGAGCCACATCTGTGACGCCATCTACAACTCCGCCATGGACACCCTTGGCAAGAAAGAGAGGCAGAACCCAGACTGGTTCAAAGCAGGGATCACCAAACTAGAACCAGCAATTGCAGCCAAGAGGGATACCTCAGAAAAGTCACTTGCTGCACTCAGGAATGCCAACAACTGTTGGCTGAACCTGTGTCAGGGCACCCAACTCTCTGCTGACTGTGGCAACATTTGTGCCTTGTACGACGGCTTGAAGAAAGCCTTTGGCCCAAGTGCCACCAAGACTGCCCCCTCAAGTCCTCTACTGGCAACATCACAGATCGAGGCAAATAGATGGAGAAATGGGCTGAACATTAGCAGAAACTCTACCGGCGGGAGAATGCCGTCTCTGACACAGCTATCCAGAGCACCAGCACTTTGCCTGTCATGGAAGAGCTGGATAATCCACCCTTGGTGGAGGAACTGA

Transcript

BRAKERYMET00000034936

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9ZNT0	Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 OS=Arabidopsis thaliana OX=3702 GN=SKD1 PE=1 SV=1
Q9UN37	Vacuolar protein sorting-associated protein 4A OS=Homo sapiens OX=9606 GN=VPS4A PE=1 SV=1
Q0VD48	Vacuolar protein sorting-associated protein 4B OS=Bos taurus OX=9913 GN=VPS4B PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001842 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00004 all species →	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan
PF14529 all species →	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003959 all species →	Domain	ATPase, AAA-type, core	Interproscan
IPR050304 all species →	Family	Microtubule-severing AAA ATPase	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR036691 all species →	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR005135 all species →	Domain	Endonuclease/exonuclease/phosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23074 all species →	AAA DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0140603 all species →	Molecular Function	obsolete ATP hydrolysis activity	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000034936.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.