Gene detail

Detailed information of BRAKERYMEP00000035013.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029190892.2, smoothened homolog isoform X1 [Acropora millepora]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O42224	Protein smoothened (Fragment) OS=Gallus gallus OX=9031 GN=SMO PE=2 SV=1
Q99835	Protein smoothened OS=Homo sapiens OX=9606 GN=SMO PE=1 SV=1
P56726	Protein smoothened OS=Mus musculus OX=10090 GN=Smo PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007864 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01534 all species →	Frizzled	Frizzled/Smoothened family membrane region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000539 all species →	Domain	Frizzled/Smoothened, 7TM	Interproscan
IPR017981 all species →	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR015526 all species →	Family	Frizzled/secreted frizzled-related protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11309 all species →	FRIZZLED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007166 all species →	Biological Process	cell surface receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0004888 all species →	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0005113 all species →	Molecular Function	patched binding	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0005929 all species →	Cellular Component	cilium	Interproscan
GO:0007224 all species →	Biological Process	smoothened signaling pathway	Interproscan
GO:0007389 all species →	Biological Process	pattern specification process	Interproscan
GO:0007417 all species →	Biological Process	central nervous system development	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan
GO:0030425 all species →	Cellular Component	dendrite	Interproscan
GO:0071679 all species →	Biological Process	commissural neuron axon guidance	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000035013.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.