Gene detail

Detailed information of BRAKERYMEP00000035403.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_044180835.1, regulating synaptic membrane exocytosis protein 2-like isoform X5 [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000035403

ATGCTCACAAAAACTGGGAACTGGTTTGGATCATTAACTGCACCAAGTGAAAAGGCAAAGAGTGATGACACAGACTCTCTTGGAAGTGACTTTAGGGCAATCCCGACAGAGGAAGACAAACGAGCAATGAGGCGACAAGCTAATTCACTTCAGAGGTCTGACTCTGCAAGAGGTAGTGGTCGACGGGGGAAAGGCAAAGAGAGTGATCATAATCGTGTTCGTAGGCCATCCGTTTCTGATGAGGAAGTGGACCATTCACCGTCAGGGAGTCCAGCATATTTAAGTGATGATGAATTGTACAGAACTGATGGAAACAAAGTTCGGCGTAAAGTAGTGAAATTTAAAGGACATGATGAGTTGGACCGATCACCTCAGGGTCATCATCCCGGGGCAATGCAGAATAGGTCAGCTCCTTTGAACCAGGGACCAGGCAGAGGAGTGGCAGTGCCTGGCCATGGTCCAGGTGGGAGACCAGGATTTCCACATCCTCAGGGGTCAGGAGTGAGGCCAGCTGGGATGGGCAATGCTCCTCAACCTCGAGGAATGCTTGGTCCTGGTAATCAACAGCAAGGATCAAGTTTCACCCCATTGGGGCATCCAGGAACATCACCATCAAATCGTCCAGTGTTTCCCCCACCTCAGCAACAGGGTCCAAGGGGAAGTATGTCCCCAAATCAACCCAGGCCTGGATTTGGAACAAGGGGACCTCAAGGGCCACAGCAACAAAGAATCCAGGGACCTCAACAACAAAGTGCTGCTGGTTATGGGAGAGGCACTGCTCCTGGAAGCCAGCCTGGAGCCCAACCAGGTGCTCAACCTGGACAGCCTGGACAGCCTGGTCATGGAAGGGGAGGATCAGCTGGTGTGCAACCTACCACACAATATAATTTGGGCCCCAGACCAGGGGCTTATGGTCCCTCAGGACCAAAACCTCTGGGTGGGCTCCCTCCAAATCATGTTGGGGGTACACAGAAGCCACCAGGGAGCCCTAGACCTGCTGACCGCTTAGGAACTCTGCAAGGTCCAAGAACTGGTGGTCCACAAGGATTGGCTCCAATGGGTCCCAGGTTTGGTCCTGGTGGACAGCCTCATCGTGGGATGCCTCCAGACCAACAGGGTGCTCAACAGCAACATCCAGCACAAATAGGCTTACCCAGACAGGGCCAGGCACCTCCTGGTCACATAGGCTCACCAAGACAAGGTCAGGTTTCCCCTGGACAGTTAACTTCACCAAGGATAGGGCAGGTCTCTCCTGGACAGTTAAATTCTCCAAGGCAAGCACAGCTTCCCCATGGGCAGTTAGGTTCACCAAGACCAGGGCAGGGCCCTCCTGGACAATTAAGTTCTCCAAGGCAAGGCCAGGTTCCTGGTCAGTTAGGTTCACCAAGGGATGGACAGATTCCTGGTCAATTCATGACTCCAAGGCAAGGGATCCAGTTAGATCAACATCCAAGGGCACAAATGGGGTCACCTCATAGTGGCTATCCAGGGGAGCAAATGGCCTCGCCCAGGCTGAGTGCACCAAAGAACCAGTCGGGTGCACCTCAGAAAGCACCTTTCCCAGGGCAGGTTGATACTTCAAGGGAGCACACAAGGGGGAGGCCAGGACCACCCCCAGCAGATCCAGGCTTGGATCATCCCAGAGGACGCCATGCTGGAAAACAGGGTTCTCCTGTTGATACATCTGGGGGACACCCTGGGTCCCCACAACAAGCACTAGTGATGGAGCATCCCAGAGGACCCTTTGGGAACAAACAGAGCCCTCCTGTAGACCAACCAAGAGGTCAGTTTGAATCGTCACAGCAAGCACCAGTGCTGGACCaaggaaaaccaagaattgGTTCCACTGATAAGGGAGCATTGGTAGATAAGGCAGAAGGACATGGAGTGCTTGATTCTAGGAATGGGTTCAGTCCAGAGTCACAGAGTGCAGGTGTTCACAGGCTTCCTGACCAAACTGCTCCAGGCATGCATCCGAGAGTGGACAGCAGAAACAGACAGATTAGCGATGATTCTACCATGAGTGGAAGAACAGGCTCTTTGTATAATGCCAACAGACAGGACAGACCAGACCAGAGATCAAGTGGTGATACTGATGGAAGCACAATGGGGCGGTCTACTAGACCCCCATTTAGACCAGGAATCCAGAGTGGTCTGACTAGGCCTTATGGGGAAGACATTGATGGCAGAAGAACTCCCCCAGCAACAATTTCACTTTATGATCCCAAGGATAAAAGTAACTTGTTCTTTAAGGATGACCCTCCATCCATGCAAGATCGAGGCTCACTGGGTGATCGATTTGTTAGTGCCTTATCTATCAAGAGAACTTCTTCCCCTCCtgtttcctcttcttcttctctttcctcTTCTGTGATGGCTTCTGCCGTCACGCCTTCTCCTGCAAGATCTGCTTTTATTGAGGAAAACAGAGATGATCCTTTACAGACTTCTATAAAGTGGTCTCAGCCAGACGAGGACAATAAGTGCTTTGGAGAGGTGCATCTGACGATTGATCCAAAATGCAGAGGATCGTCTACTGATCCCTATGCAGCATACGGTTTGAAGGTAATTGGCGGCAAGAAAACTGATGATGGCAAACTTGGAGCTTTTATTACTGAAATAAGAAAAGGAGGCCCGGCAGATAGACAAGCACAACTGCAGATAGGTGATGAAATTCAGGAATGGAACGATCAATCATTGGTCGACTGCACTTTTGAAGAAGTTGTGGAGAGTATCAATTCATCTATGGAGGACAACCAAGACAGTAACGAACTTCATCTGATTGTTTGCAGAGAAAAGAGTAAATTTCCAACAAAGAGCAGTCAGTTGCAAGGGAAGTTATCACAAGGTCAGGAAATAAAGAGCGAGTTCCCAAAACAGGCCCCCAAGAGAGATTCCCCAGTGAGGACGGACCGCATGTCACCTTCTTCTGCAGCACCCATGTCTCGGAGGGATAGCACAGGAATACCAACCCAGAGGGAAAACATCACTGGAATTTCAGCAGTGAGAGAGAATGGTTCTCCAGTGAGTGGCAGAACCCAACCTTCAACCCATGAACCAAGTTTTACAGATAGTGATGACTTCTTCTTTGGAGGTGGTCCTTTATCCGATGAAAAACCGATCAAGTCTTTGAAGCAAGGATCATCATCTCAGCAGAGTGCCGCAGGAAAACCAACAAGAGTCACTGGTCGAGTTCAGTTGAAGCTGTTTTATGATGAAGACGCTGCTAATTTAAATGTGACCGTAGTTGGAGCTGAAGGCTTGGCGCTCAAAGAATCCACGACCCCGCCCAATCCCTATGTCAGGATTTATTTTCTACCTGATAAGAGTATGCAGAGCAAACGGCGCACCAAAACAGCTATGAAATCTACTAATCCTAAATGGAACCAGACCTTTGTTTATCCTTGCAGGCCACAGAAGttcagTGGCCGAGCTCTTGAAATCACCGTATGGGACTATGACAAGGTTGGCTCCAGTGAATTCATCGGCGAGGTTGTATTGAGCATGACCGAGGCGAATCTTGATGGTAATGGGTACTGGTACCCACTGAAGAGCCATGAGGACGAAAACGATCCACTGGTACCACCAACTCCGAACCAGTCCCCTCATAACTCATTCAGATTCAAGGGATCGAGAGGGCCTGGCGAGACAGCTGAGCAAGCCGGTTCACCTGGTTATGGTAGTGATTATGAGGAAGAAGCGAGATATACTCCAAACGGCCCGGGAACTAGTTCCCAACCTCCACATCACACACATGAGAACGAGCTGTTGAAGCAGCAGTTGATTGATCATCATCGAGACAGTCCCAGGCCCCCATTTACGCAACCGCAGATGGTGCAAGCTTACACTGTGAAGCAATATCATACGTCACCACCTCACCTGTCCCAGTCTCCTCAACCAAGCTACCCAAATTACGCCGCTGACCCCAACAGAATGCAGCCGCAACAGACTAGAACCATGCCTCCTCACCTGCATGGAACCGCTGGCCGTTTTCATGACGAGCGTATTTCCCCGAGCATGCAAGGTTATACCTCCCCTGGATCGTATTCCCCTGGTAGAATGTCCCCTAGCGGAGGCCCCGGGGCTAAAAAGTCCCGGTTGTTGCCACAATTGCCTCCAGGACGGGAAACGATGGACGAGGAAGAAAGAGCAAGGGTCGCTAAACAGAAATTAAAAGAGGTCGACCCCGCGAGAGCGAAATTGATTGTCGACAGCGCTAAAGGGAGGATGGGATATGGTCGTGCCCCAGACTCCGTGTATTCACCGCTAAATGAGGGCTTGTATGATCCAAGCATGTCTCCGAGGCCTGGAAGCCAGTCTCCGAGGCCTATGCAAAGAAAGGGGAGTCCATCCCCCTTACCGGGGCCAAAACATTCTTTGGGGATGTTCCCACATCATCAGGGACTGCACACACCGCAAGAGCGCACGTATTCACCAGACATCACCCCGCATGATCGAGGAGCGCCATACGAAAGCCACAGGAGAGCTCaGACTGCACCTACACGACGCCGTAACAGCTTAAGCAGTCTACCGCTGAACGACACTGAAGGGGAGAGGTCGCGTAGTCCTTTTCCTCCGAGTCCAGTACCTCTCGGTCATGGCAGGAGTCTTAGCAGTTCAAGTTTGCATGATAAGGACCGCGGTTTGCCTAATGGCCAGCTGCTGGTTCGTGAAGAAGCTTGTTCCGGTAGTGTTAATGATCTCCATGTCTTCCCTACAGGGGGATATATGAAGCAACCCCGTCGGATGGCAGGCGGTGACAGTGTGGGCGGAAGTGGGCGGAGCAGCCGCTCATCGTCAATTGCAAGTGACAGGAGCGGAAGCTTGAATAGCATACCAGGCTCGGTAACAAGCTGCGAGAGTAGGTAG

Transcript

BRAKERYMET00000035403

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9JIS1	Regulating synaptic membrane exocytosis protein 2 OS=Rattus norvegicus OX=10116 GN=Rims2 PE=1 SV=1
Q9UQ26	Regulating synaptic membrane exocytosis protein 2 OS=Homo sapiens OX=9606 GN=RIMS2 PE=1 SV=2
Q9EQZ7	Regulating synaptic membrane exocytosis protein 2 OS=Mus musculus OX=10090 GN=Rims2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001484 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00595 all species →	PDZ	PDZ domain	Domain	Interproscan
PF00168 all species →	C2	C2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001478 all species →	Domain	PDZ domain	Interproscan
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR036034 all species →	Homologous_superfamily	PDZ superfamily	Interproscan
IPR039032 all species →	Family	Rim-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12157 all species →	REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0006887 all species →	Biological Process	exocytosis	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:0042391 all species →	Biological Process	regulation of membrane potential	Interproscan
GO:0042734 all species →	Cellular Component	presynaptic membrane	Interproscan
GO:0044325 all species →	Molecular Function	transmembrane transporter binding	Interproscan
GO:0048167 all species →	Biological Process	regulation of synaptic plasticity	Interproscan
GO:0048788 all species →	Cellular Component	cytoskeleton of presynaptic active zone	Interproscan
GO:0048791 all species →	Biological Process	calcium ion-regulated exocytosis of neurotransmitter	Interproscan
GO:0050806 all species →	Biological Process	positive regulation of synaptic transmission	Interproscan
GO:2000300 all species →	Biological Process	regulation of synaptic vesicle exocytosis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000035403.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.