Gene detail

Detailed information of BRAKERYMEP00000035552.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_015766188.1, PREDICTED: nuclear RNA export factor 1-like isoform X2 [Acropora digitifera]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q99JX7	Nuclear RNA export factor 1 OS=Mus musculus OX=10090 GN=Nxf1 PE=1 SV=3
Q9UBU9	Nuclear RNA export factor 1 OS=Homo sapiens OX=9606 GN=NXF1 PE=1 SV=1
Q1RMS5	Nuclear RNA export factor 1 OS=Bos taurus OX=9913 GN=NXF1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003680 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03943 all species →	TAP_C	TAP C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032710 all species →	Homologous_superfamily	NTF2-like domain superfamily	Interproscan
IPR005637 all species →	Domain	TAP C-terminal (TAP-C) domain	Interproscan
IPR018222 all species →	Domain	Nuclear transport factor 2, eukaryote	Interproscan
IPR030217 all species →	Family	Nuclear RNA export factor	Interproscan
IPR009060 all species →	Homologous_superfamily	UBA-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10662 all species →	NUCLEAR RNA EXPORT FACTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0051028 all species →	Biological Process	mRNA transport	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0016973 all species →	Biological Process	poly(A)+ mRNA export from nucleus	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000035552.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.