Detailed information of BRAKERYMEP00000036605.1 in Astreopora myriophthalma

Genomic Location: BLFK01001084.1:365501...368486
NR annotation: XP_020628153.1, zinc finger protein GLI2-like [Orbicella faveolata]
Species Astreopora myriophthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8VDL9Zinc finger protein GLIS2 OS=Mus musculus OX=10090 GN=Glis2 PE=1 SV=1
Q9BZE0Zinc finger protein GLIS2 OS=Homo sapiens OX=9606 GN=GLIS2 PE=1 SV=2
Q98T94Zinc finger protein GLIS2 OS=Xenopus laevis OX=8355 GN=glis2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009225 (this species only) · gene tree & orthology
Transcription factor familyzf-C2H2 · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21816
all species →		Zap1_zf1Zap1, C2H2 zinc finger 1DomainInterproscan
PF00096
all species →		zf-C2H2Zinc finger, C2H2 typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036236
all species →		Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR013087
all species →		DomainZinc finger C2H2-typeInterproscan
IPR043359
all species →		FamilyC2H2-type zinc-finger protein GLI-likeInterproscan
IPR048420
all species →		DomainZap1-like, C2H2 zinc finger 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45718
all species →		TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUSInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000977
all species →		Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERYMEP00000036605.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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