Gene detail

Detailed information of BRAKERYMEP00000036721.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_022780305.1, LOW QUALITY PROTEIN: protein flightless-1 homolog [Stylophora pistillata]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000036721

aTGCATGGATTGTGTTTTTCTATAGTTCCGGAGCCAGTATACTTGATTGCCAGTCTAAAGAGGGTTAACCTGTCACACAACCAGATCACTGAAGTGTCCTCACTCATTGATACATGGACGCAATTGGAAGTATTGAACTTATCAAGGAATCAACTCACAGGACTGCCAgcagcACTTTGTAAACTTGTGGCTcttaaaaaattgtttataaATGGCAACAACATCAACTTTGAGGGGCTGCCTACTGGAATTGGAAAGCTGTACAATCTTGAAGTGTTCACAGCAGCATGCAATAAACTGGAATGCATTCCAGAGGGGTTATGCAGGTGTATTAAGCTGCGTAAACTCATTCTTCATACAAATTGTTTGTTTACGCTTCCGGAAGGAATTCACTTTCTGACAAGCATGGAGGAACTTGATGTGCGTAATAATCCGGAGCTGGAGATGCCTCCTAAACCTGTTCCCGATGAGCTGGGGAGTGGCCCAGAGTTTTACAATGTGGATTTCACACTACAGACTCAGCTTAGAATGGCCACAGGAGCACCACCTCCACAGCCCTCTCACAAAGATTCTTATGCCAGGAAGATGCGAATGAGAGGAAGGCGACACCATGGTCAGCCAGAGGATCTTAAGGGTATGGTAGAGGATGCTGAAGAGAAAAAAGCAACTGGAAGAAACAAGAAGTTGGGTAAAAGAGAAAGCATTGATGAGCCTGAGAAGTTGTTGAGAGGAAGAAAGTGGAATGAGTCCTTAGTGAAACCCAATTTGAACTATCATGATTTCTTTAATGATGTCACTGGGCAGGAACCAGGTTTGACTGTGTGGCAGATTGAAAACTTTTTACCAGTGGCTGTAGATGAATTGTTTTATGGCAAGTTCTATGAAGCAGACTGCTACATTGTTCTGAAGACCACTTTTGATGACACAGACCAGCTCTTCTGGCAAATTTTTTACTGGATTGGAAGGGAAGCTTCTCTTGACAAGAAGGCGTGTTCTGCCATCCATGCAGTGAATCTCAGGAATTTCCTTGGAGCAGAGACACGGACTGTGCGTGAGGAACAAGAAGATGAATCTGAGGACTTTTTAGAACTATTTGAGAATGGAATCAGTTATGTGGAGGGTGGTACGGCAAGTGGATTTTACACAGTTGAAGACCCAATCTACCCAACCAGATTGTTTAGGATTCTCAAGACATCTAAAGTTCAGCTGGAGCCAGTAGAAGTGAGTAGCTCAGCACTGGATCCAacattctcctttgtcttgGATGCAGGTCTAAAGATCTTTATCTGGTCTGGACAGAGGGGAGACGAGCCTGGAGAATTCTGGAGATTACTTGGTGGCCGCCCAGAAGGAGCTATCATGGAAAAACCAGAGTATAAAGAAAATCCTGCTGCACCAATCCTCTATCAAGTGGCCTTAGGACTGGGCTATTTGGAGCTTCCACAAGTGGATATTCCTGATGGGAAGTTGACAACCAAACTGCTTGATACTAAGAATGTTTACATCCTGGACTGCCATTCAGAGATCTTTGTGTGGATTGGTCGTAAATCAGCCCGCTTGGTGCGTGCTGCAGCAATGAAGCTTTCACAGGAGCTGTATTCCATGATAGACCGACCATCATTCACTATTCAAATACGTAACCTTCAAGGTGCTGAGTCTCACATGTTTAAGGCCCGATTTCTTGGCTGGGATGATGTGCTTGCTGTAGACTACACTCTTAGTGCTGACTATGTTTCAAAGGCTTCAAAACAGCTGGGGAGCACTAATATAACAACCAAGGAAGCTCAGGCTAAACTCCAGAAGGTTGCTAAGGTTGATTTATCTGCTCTGTTCACCACAAGACAGCAACCCATGCCAAACAGTGAACAGgaACAATTTGTAGAGGAGTGGAATGAAGACCTTGATGGAATGGAGTGCTTTGTCTTGGAAGGAAGGAAATTTGTTCGACTACCTGAAGAAGAGATCGGTCATTTCTATACGGGTGACTGTTATGTGTTTCTGTGTCGTTACTGGGTTCCTGTTGGACAGCCTGTGGGCGATGAtgacgaagacgaagaagaagaagaagagtcaGTAGAACAGGAGGAAGACTTTCAATGTGTTGTTTATTTTTGGCAGGGAGACGAGCCTGGAGAATTCTGGAGATTACTTGGTGGCCGCCCAGAAGGAGCTATCATGGAAAAACCAGAGTATAAAGAAAATCCTGCTGCACCAATCCTCTATCAAGTGGCCTTAGGACTGGGCTATTTGGAGCTTCCACAAGTGGATATTCCTGATGGGAAGTTGACAACCAAACTGCTTGATACTAAGAATGTTTACATCCTGGACTGCCATTCAGAGATCTTTGTGTGGATTGGTCGTAAATCAGCCCGCTTGGTGCGTGCTGCAGCAATGAAGCTTTCACAGGAGCTGTATTCCATGATAGACCGACCATCATTCACTATTCAAATACGTAACCTTCAAGGTGCGGAGTCTCACATGTTTAAGGCCCGATTTCTTGGCTGGGATGATGTGCTTGCTGTAGACTACACTCTTAGTGCTGACTATGTTTCAAAGGCTTCAAAACAGCTGGGGAGCACTAATATAACAACTAAGGAAGCTCAGGCTAAACTCCAGAAGGTTGCTAAGGTTGATTTATCTGCTCTGTTCACCACAAGACAGCAACCCATGCCAAACAGTGAACAGGAACAATTTGTAGAGGAGTGGAATGAAGACCTTGATGGAATGGAGTGCTTTGTCTTGGAAGGAAGGAAATTTGTTCGACTACCTGAAGAAGAGATTGGTCATTTCTATACGGGTGACTGTTATGTGTTTCTGTGTCGTTACTGGGTTCCTGTTGGACAGCCTGTGGGCGATGAtgacgaagacgaagaagaagaagaagagtcaATAGAACAGGAGGAAGACTTTCAATGTGTTGTTTATTTTTGGCAGGGAAGAGATGCAAACCAAATGGGTTGGCTGACATTTACTTTCAGTCTTCAGAAGAAATTTGAAATGCTGTTTGGTGAAAAACTAGAAGTTTTGAAGACTAATCAGcaaCAAGAGGCACCAAGATTTCTAGCTCACTTTAAAGGAAAGTTTATCATTCACAAGggaaagagaaaggaaccAAAGAAAGGAGAGAAGAGCAAAGCTAAATTGTATCACATCCGGTCCAGTGGGGGAATATTGGCTAAGAGAGTAATTGAGATTGAGCCAAGTGCAAAGCACCTGAACTCTGAATTTTGttacATTTTGAAAGTTCCTTTTGAAAATTATTCTGAGGATGGGATAATTTATGTTTGGATTGGCAGCAAAGTTACTGAAAGTGATGCTGACCATGCCAAAGAACTTGGAAATGAAATTTGGGATGTAAGTTTATCATATTCCATAATGAGAGCTTCAATTCAGTCTTTAATTTGA

Transcript

BRAKERYMET00000036721

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q13045	Protein flightless-1 homolog OS=Homo sapiens OX=9606 GN=FLII PE=1 SV=2
F8WK50	Protein flightless-1 homolog OS=Danio rerio OX=7955 GN=flii PE=1 SV=1
Q9JJ28	Protein flightless-1 homolog OS=Mus musculus OX=10090 GN=Flii PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003309 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00626 all species →	Gelsolin	Gelsolin repeat	Domain	Interproscan
PF13855 all species →	LRR_8	Leucine rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003591 all species →	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR007122 all species →	Family	Villin/Gelsolin	Interproscan
IPR029006 all species →	Homologous_superfamily	ADF-H/Gelsolin-like domain superfamily	Interproscan
IPR007123 all species →	Domain	Gelsolin-like domain	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11977 all species →	VILLIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:0005546 all species →	Molecular Function	phosphatidylinositol-4,5-bisphosphate binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0008154 all species →	Biological Process	actin polymerization or depolymerization	Interproscan
GO:0015629 all species →	Cellular Component	actin cytoskeleton	Interproscan
GO:0030239 all species →	Biological Process	myofibril assembly	Interproscan
GO:0051014 all species →	Biological Process	actin filament severing	Interproscan
GO:0051016 all species →	Biological Process	barbed-end actin filament capping	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K27496	FLII; flightless I actin remodeling protein	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.