Genomic Location: BLFK01001094.1:336888...339791
NR annotation: XP_029203020.2, retinoic acid receptor RXR-alpha-like [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families
| CDS |
| BRAKERYMET00000036998 |
| Transcript |
| BRAKERYMET00000036998 |
| Protein |
| BRAKERYMEP00000036998.1 |
| UniProt accession | Description |
|---|---|
| Q90416 | Retinoic acid receptor RXR-gamma-A OS=Danio rerio OX=7955 GN=rxrga PE=2 SV=2 |
| P51128 | Retinoic acid receptor RXR-alpha OS=Xenopus laevis OX=8355 GN=rxra PE=1 SV=1 |
| Q6DHP9 | Retinoic acid receptor RXR-gamma-B OS=Danio rerio OX=7955 GN=rxrgb PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000188 (this species only) · gene tree & orthology |
| Transcription factor family | ESR-like · all TF in this species |
| Transcription factor family | Miscellaneous · all TF in this species |
| Transcription factor family | NGFIB-like · all TF in this species |
| Transcription factor family | RXR-like · all TF in this species |
| Transcription factor family | SF-like · all TF in this species |
| Transcription factor family | THR-like · all TF in this species |
| Transcription factor family | GCNF-like · all TF in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00105 all species → | zf-C4 | Zinc finger, C4 type (two domains) | Domain | Interproscan |
| PF00104 all species → | Hormone_recep | Ligand-binding domain of nuclear hormone receptor | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR050200 all species → | Family | Nuclear hormone receptor family NR3 subfamily | Interproscan |
| IPR001628 all species → | Domain | Zinc finger, nuclear hormone receptor-type | Interproscan |
| IPR003070 all species → | Family | Nuclear receptor subfamily 4 group A member 1-3 | Interproscan |
| IPR035500 all species → | Homologous_superfamily | Nuclear hormone receptor-like domain superfamily | Interproscan |
| IPR013088 all species → | Homologous_superfamily | Zinc finger, NHR/GATA-type | Interproscan |
| IPR000536 all species → | Domain | Nuclear hormone receptor, ligand-binding domain | Interproscan |
| IPR001723 all species → | Family | Nuclear hormone receptor | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR48092 all species → | KNIRPS-RELATED PROTEIN-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000790 all species → | Cellular Component | chromatin | Interproscan |
| GO:0004879 all species → | Molecular Function | nuclear receptor activity | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006357 all species → | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0034056 all species → | Molecular Function | estrogen response element binding | Interproscan |
| GO:0003700 all species → | Molecular Function | DNA-binding transcription factor activity | Interproscan |
| GO:0006355 all species → | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| GO:0043565 all species → | Molecular Function | sequence-specific DNA binding | Interproscan |
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
BRAKERYMEP00000036998.1.
