Gene detail

Detailed information of BRAKERYMEP00000037340.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_015766889.1, PREDICTED: uncharacterized protein LOC107345663 [Acropora digitifera]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

BRAKERYMET00000037340

ATGGAAGGCAGTCTTGCAAGGGCTTTGTACAGTTTCCAATCGAATAACCCAGAAGACCTTTCTGTTCCTGAAGGAGGCATCATAAGGATAAGTCAGTATATCGACAAGCATTGGCTGCAAGCTGAGTATCGAGGACAGAAAGGCTTATTTCCTGTTTCTTATGCTGTGAAGTTAGAAAACAAGCCAGAGCTACACAACATTTTCCCATCAGAACCAATTTCGAATGTTAGAGAAGTTCAAGAGGACGTTACGTCCGACCGACTTCATCAACACAATCACTTCTCAGTGAAGCGAGGTGACACAGGAAAGTCATTTGTTGAGGCCTCCTTTGGTTTTATTGGGAGAAATGAAAGTGAACTTACATTTCCTGCTGGTGCTGTAATCAAAGTAActaatgatgttgatgatgattgGCTTGAAGGATCATTCAATGGACAGGAGGGACTCTTTCCAAAGAGCTATGTCAAGTCTTCAGAAAGCCAAAGGCCACATGCCCGTGCCGTTTATCCCTTTGTTGGGGAAAGTGTGGGGGAGCTCACATTCCGTGAGGGTGACTGCATATTTCTTCGCAAGCGTCTGAACTCTCAGTGGATGGAAGGGGAAATGAACGGGAATGTGGGTCTATTTCCATCAAGTTTTGTTGTAGTTGAAATTGATTTGCCACCTGAAAATGCTGACAACaaatatatgtacatgtatggggATTATTCCGTCATGGATTCAACCCCTTGGAGAGAAGAGCACAAAAAAGCTGCCACATCCAAAATTCAATGGAGAAAAGGAATGAAGGGAAAAGCAAAGTTTCATTTTTCTGCCTTATATTTAGAGGATCTGGAGTTGAATAAAGGGGATATTATTACTGTCTTGCGTGTGGATGATGATAACTGGTTAGAAGGTCAGTTAGCCAGTGGGATATGTGGGCTGTGCCCTACAGCATATCTTGAGCCTGTACATGATTCTGTGGAACAGTGGACTTCAAGAAATCAGCCTTTTCTTTTCCCAGATGAAAATTTTTTGGATGTTTCTCACTCACATTTTATACCTAAAGGAAGAGCAGATGAAATGTCAAAATATTTGTCGCAAAGTACTTTCAGTGAACCAGTTGATGAGGTTTTTGATTCCTCTGTAAAAACTGGAAGAACCTATGGGTCTCTTTTAGACTCTTCATTTACACAAGATGCAACTCCTACACTTAAGCCATACAGTTCTTCTTGCTTGGGCCAGCAGTTTAAAACATGCGAAGAGAGTAGACTACTTCAGAATTCTAAGCCATCACTTCAACCCAAACCAACTGAAGGGTATTCTGTGACTTATCTGGGTAGAAGGGAGGAAAGGAACCTTCCTGCTCAGAGAAGCTATGAAACTGCCGTTAGTCCGTCAGCTTCTTTGCCATCATTGTCAGATGAAAGAGCAAGTTTTAGTAACAATAGTTATGCATTGAGTGCAAAGACCACACCTGTCTCTAATTGCATTTCCAGACAGCCTGAGATACCTGCAGCTGCTCATAGTTCCCCAACCTATTTTCATGACTCTGTCCAAACTTGGGCAAACAAGAGAAATGATATCCATGAACGCATAGCTGAAAATGAGATCATTAAAAGAGAACTTCTCCTTTATGAtcactatgatgatgatgatgatgataatttgCTATCAGGTAATTGCACTTCATTACCACCACCCTTGCTTCCTCTGCCGCAAGGAAGAGAAGACTATGATAACATTGAATCTAGTGCATCTGATGATTCTCCAATCATTCCAAGGAGACCAGCACCTCCTCCCCCCAAAAGGAACATAAATAACATAAATCAGGTGTACGGCAGCTCTCTACCTGCAGCTCTTTCAAAAGCTACAGCACAAGGTCGCTTTAGTCAGAAGACATCACCAAAAGCAAATGGCCAAGGTGTATGGGAACGCCATGACATGAAACCAAGTACAGTTCCTCGTAGTTCTTCCCCACCAAGGAGTAAGAGAGACTCTTCCCTCTCCCCTGAGGGGTCTCCAAGGGTGAGGCATGTAGGTGATGCAAGGGATAAACTGTTGGGTAGACCGTGGCCATCACAGGGGACAGAGAACGGCTCTGGGGCCTCTACAATGGAGAAGGGTGGGCCAGAGCTGAGGCATTTAAATAGGCAGGAGCAGTTAGACCAGGGCATGGCTCGCTCTGGTGGTGTTGTCATGGTTACTGGCAGCCACTCGGAATTAGGTCATGTGAAACACAAGGAAGAACCCTCTGAAAATAGAGGCGAAGCTGAGGTACCTGGGCTGTTATTGCTACAAGACAGGATTGCTGAGACAGAACAGAACCTTAAGAAAGAGATGAATGTCCACGCTGGATTCAAGTCTATTGCTCAGCTTGTTATGACTGATCCTTTGAAGCAAAGGGAGATGGAAATTAAAGTATCACAGAGTCAGCAAAAGATTAATGAATGGCAGGAAGAGCTGAAGCATTTGAGAGATGAAAGAGTATTTTTGATAGAGTCACACCGGAAAAAAATGCTGAAGAACAAAATAGCTCACCTTGAGGCAGATCTGGAGAAACAAGTCAGAGGTCAAAGAAGTCTTGAAATGTTGCTTGGTGTTGTTGAGGAAAACAGAAAGAAggaggtcatggaaaaccttgGTGTCTGTGCAAAGTTTGTGGAGAAGATCAAGAAAGAGTTGACAGAGTTAGAAGCTTCGCTGCACAATCTAACAGAGAAACCAGCGGCTTCAAGCCAGAAACACATGACGGAACAACGGCAAAGAGTTGTGACTGAACTTGTCAGTACAGAGAGGGATTACTGCAACGACTTGGAGCTCTGTGTCAAGCACTTTCTGAATGAGCTGCAGTCAACACAGGTGAAGGATCTTGACTGTGAAGGTTTATTTGGTAACATTGAAAGGGTCCTGGAGACGTCAAAGAAACTACTGAAGAGCCTAGAAGAGGCTGTTCAAGACAAAGAGGGAAAAGATCAGGATTTAGGTAAATGCTTTGTGGACATAGCGGAAGAAATGAAGGAGGTGTACGCTGTTTACTGCAGGAACCACGACGATGCAATCTCACTgatggaaaagTATGAAGATATGTTTGAGATACAAGATGCCTTCTCGAAATGTTTAGAGAAAATCAGggaGCATACCCGATGCTGGGACTTGTCATCATTCCTCATCAAACCGGTGCAGAGGGTTCTTAAATACCCGCTCTTGTTAAATGAGCTTCTCAAGTACACTCCTGAAATTCACCGTGATAAATACAACTTGATACAAGCGATCTCAGTTATGACTGAGGTGGCGACTGCAATTAACGAGTTTAAAAGACGAAAGGATCTCGTTATCAAGTACAAGAAAGTGGAGGACAGTGGGTTGACAAATATGATACAAAAGTTGAGTTGGCATTCAGTGGTCAAAAAAAGCACTCGATTTAACCAGAGACTAACACAGCTCACAGGACTGGTGTCACAGACTGTCGACGAAAAATTcattgaagaagaaaagaagtTCCGTGGGATAGAGAAAACGGTGAAACTACTGTTCAAAAACATCTCCAGTTATCTGACGGAATTTCAGGAAACTATGGAGTGCGGACAGGCGTCAGGAGGGAATATTAGTGAGTTCTATCAAGATGCTGCTACTTGTACAGAGGTCTCCACATTTCACAGGATACAGAAAATGATTGGAGACACTATCCTTATCAGATATatgGACACTGTTCAGGTGCAAGTGTTGTCTCCGCTAAATTCCTTGCTAAGCCTGTTTCAAGGTCCGCAGCGTTTGATTCAGAAGCGAAACGACAAGTGCTTGGACTACGACCGCTGGTCAAACAAGATCGACAAGATCAAGGATAGGGACAAGTTGAAGACGGCCAAGGAAGAACTAGAAGTTGCCAAGAAGAACTACGAAGCACTGAACACACAACTACTGGAGGAGATACCTGGTTTCACTCAGAAGTGCATGTCTGTGGTGGTTGATTGTCTGAAGAATTTTGCAGTGGCTCAGAACAGATTACACTATGAAATACAGCAAGAATATGAACAGCTTTTACAGTTGCCTGTTATACAGTGTTTGGAAGGCGACATCGTTGAACAGCACAGTAAGAGGTCAGTGCAGGTGATAGAACGCTTCGCAGATCTGAGCTTCATACCGTGCAGTTTTGTGGCAAAGGACAGTTcacgaaagaaaagaagatCTGTGAAGAGCCCAAACTCGAGCACGCAGGATCCAGACTTAATAGAGGACGATAAGGAGCCCAAAACCACCCTAGTGGATTATAGAGAAGTCGAACTTGTTGAGGAGAGTGGGGTGGGTGAAACAAATCCTGCCCCAACCCCTCCATCCACGATTCAACCGCGACCAGCACCAAGAAGAATAAGTAGCACAGCGCGACCGGACTCGAGAAGTGCCGATAGCCCTTTGGGGATTGTGTTGTCACCAGGCGAAGGGAACCTCCACACTGTCGAATTCAACTTTGAAGCTCAAAGTGCAGGTGAATTGTCCGTGTCTGAAGGCGAAGTTGTCTCTGTCGTGAGATACTCGGACACAAGCGGTAACCCGGAGTGGTGGCTGATTCAGCGTAATGGTGCGACAGGGTATGTTCCCCAGAATTTTCTCTACCCGTTCAGTGATAACGAGGCTGTCGATGGTGCTTTTGAAAATGGCGTCGTGGGTGATGGTGACAGCAGTAGTGGAACGACACAGGACTCTGTCGGGAATAAAGCCGTAGGAGAAAACAGCAATGTGTTCTTGAGACAAGACACTAACGCGAATAAGCGCTACTATGCAGAGTTCGAGTTCGAGGCTAGCAGTCCGGCCGAGTTGAACTTGGCGGAGGGACAGCAtgttgtcattttgcaaaagcaGGATCTTACGGGCAACGACGAATGGTGGCTTGTTGAGGCGAACGGCCAAAAGGGATATGTACCCTCAAGTTACTTAACACCAGTGGAAGATTGA

Transcript

BRAKERYMET00000037340

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
E7F1U2	Dynamin-binding protein OS=Danio rerio OX=7955 GN=dnmbp PE=2 SV=1
Q6XZF7	Dynamin-binding protein OS=Homo sapiens OX=9606 GN=DNMBP PE=1 SV=1
E2RP94	Dynamin-binding protein OS=Canis lupus familiaris OX=9615 GN=DNMBP PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004368 (this species only)
Ubiquitin family	UBD\|Other\|SH3 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14604 all species →	SH3_9	Variant SH3 domain	Domain	Interproscan
PF07653 all species →	SH3_2	Variant SH3 domain	Domain	Interproscan
PF00018 all species →	SH3_1	SH3 domain	Domain	Interproscan
PF00621 all species →	RhoGEF	RhoGEF domain	Domain	Interproscan
PF03114 all species →	BAR	BAR domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR004148 all species →	Domain	BAR domain	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR035899 all species →	Homologous_superfamily	Dbl homology (DH) domain superfamily	Interproscan
IPR027267 all species →	Homologous_superfamily	AH/BAR domain superfamily	Interproscan
IPR001331 all species →	Conserved_site	Guanine-nucleotide dissociation stimulator, CDC24, conserved site	Interproscan
IPR051492 all species →	Family	Dynamin-binding and Rho GEF	Interproscan
IPR000219 all species →	Domain	Dbl homology (DH) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22834 all species →	NUCLEAR FUSION PROTEIN FUS2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20705	DNMBP, ARHGEF36, TUBA; dynamin-binding protein	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.