Gene detail

Detailed information of BRAKERYMEP00000037980.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_029197469.2, S1 RNA-binding domain-containing protein 1-like [Acropora millepora]
Species Astreopora myriophthalma · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P14128	Small ribosomal subunit protein bS1 (Fragment) OS=Providencia sp. OX=589 GN=rpsA PE=3 SV=1
P37985	Small ribosomal subunit protein bS1 OS=Dickeya dadantii (strain 3937) OX=198628 GN=rpsA PE=3 SV=2
P0AG69	Small ribosomal subunit protein bS1 OS=Escherichia coli O157:H7 OX=83334 GN=rpsA PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003648 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00575 all species →	S1	S1 RNA binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003029 all species →	Domain	S1 domain	Interproscan
IPR050437 all species →	Family	Bacterial ribosomal protein bS1	Interproscan
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10724 all species →	30S RIBOSOMAL PROTEIN S1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0003729 all species →	Molecular Function	mRNA binding	Interproscan
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERYMEP00000037980.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.