Detailed information of CAB3976555.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB3976555.1, DNA ligase 3-like [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P49916DNA ligase 3 OS=Homo sapiens OX=9606 GN=LIG3 PE=1 SV=2
P97386DNA ligase 3 OS=Mus musculus OX=10090 GN=Lig3 PE=1 SV=2
P16272DNA ligase OS=Vaccinia virus (strain Western Reserve) OX=10254 GN=OPG180 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01068DNA_ligase_A_MATP dependent DNA ligase domainDomainInterproscan
PF16759LIG3_BRCTDNA ligase 3 BRCT domainFamilyInterproscan
PF10283zf-CCHHPBZ domainDomainInterproscan
PF04675DNA_ligase_A_NDNA ligase N terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036599Homologous_superfamilyDNA ligase, ATP-dependent, N-terminal domain superfamilyInterproscan
IPR016059Conserved_siteDNA ligase, ATP-dependent, conserved siteInterproscan
IPR012310DomainDNA ligase, ATP-dependent, centralInterproscan
IPR000977FamilyDNA ligase, ATP-dependentInterproscan
IPR031916DomainDNA ligase 3, BRCT domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR050191FamilyATP-dependent DNA ligaseInterproscan
IPR019406DomainAprataxin and PNK-like factor, PBZ domainInterproscan
IPR001357DomainBRCT domainInterproscan
IPR012308DomainDNA ligase, ATP-dependent, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45674DNA LIGASE 1/3 FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003910Molecular FunctionDNA ligase (ATP) activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0003909Molecular FunctionDNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0071897Biological ProcessDNA biosynthetic processInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006266Biological ProcessDNA ligationInterproscan
GO:0006273Biological Processlagging strand elongationInterproscan
GO:0006288Biological Processbase-excision repair, DNA ligationInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0070421Cellular ComponentDNA ligase III-XRCC1 complexInterproscan

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