Gene detail

Detailed information of CAB3976725.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB3976725.1, nesprin-1-like isoform X1 [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q9UPN3	Microtubule-actin cross-linking factor 1, isoforms 1/2/3/4/5 OS=Homo sapiens OX=9606 GN=MACF1 PE=1 SV=4
D3ZHV2	Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1
P30427	Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17902	SH3_10	SH3 domain	Domain	Interproscan
PF00435	Spectrin	Spectrin repeat	Domain	Interproscan
PF00307	CH	Calponin homology (CH) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018159	Repeat	Spectrin/alpha-actinin	Interproscan
IPR041615	Domain	Desmoplakin, SH3 domain	Interproscan
IPR043197	Family	Plakin	Interproscan
IPR002017	Repeat	Spectrin repeat	Interproscan
IPR036872	Homologous_superfamily	CH domain superfamily	Interproscan
IPR001715	Domain	Calponin homology domain	Interproscan
IPR001589	Conserved_site	Actinin-type actin-binding domain, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23169	ENVOPLAKIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005198	Molecular Function	structural molecule activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005882	Cellular Component	intermediate filament	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0042060	Biological Process	wound healing	Interproscan
GO:0045104	Biological Process	intermediate filament cytoskeleton organization	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06115	SPTBN1_4_5; spectrin beta, non-erythrocytic 1/4/5	-	Cytoskeleton proteins	ko04812	deepkoala