Genomic Location: not available for this species
NR annotation: CAB3976784.1, TBCC domain-containing 1 isoform X2, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3976784.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q9NVR7 | TBCC domain-containing protein 1 OS=Homo sapiens OX=9606 GN=TBCCD1 PE=1 SV=1 |
| A4IF93 | TBCC domain-containing protein 1 OS=Bos taurus OX=9913 GN=TBCCD1 PE=2 SV=1 |
| Q5FVR8 | TBCC domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Tbccd1 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0007104 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF07986 all species → | TBCC | Tubulin binding cofactor C | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR017901 all species → | Domain | C-CAP/cofactor C-like domain | Interproscan |
| IPR039589 all species → | Family | TBCC domain-containing protein 1 | Interproscan |
| IPR006599 all species → | Domain | CARP motif | Interproscan |
| IPR012945 all species → | Domain | Tubulin binding cofactor C-like domain | Interproscan |
| IPR016098 all species → | Homologous_superfamily | Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR16052 all species → | UNCHARACTERIZED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0031616 all species → | Cellular Component | spindle pole centrosome | Interproscan |
| GO:0051661 all species → | Biological Process | maintenance of centrosome location | Interproscan |
| GO:0051684 all species → | Biological Process | maintenance of Golgi location | Interproscan |
CAB3976784.1.Transcript abundance of CAB3976784.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
