Gene detail

Detailed information of CAB3976803.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB3976803.1, Helicase with zinc finger domain 2 [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
E9QAM5	3'-5' exoribonuclease HELZ2 OS=Mus musculus OX=10090 GN=Helz2 PE=1 SV=1
Q6NYU2	Probable helicase with zinc finger domain OS=Danio rerio OX=7955 GN=helz PE=2 SV=1
Q6DFV5	Probable helicase with zinc finger domain OS=Mus musculus OX=10090 GN=Helz PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13087	AAA_12	AAA domain	Domain	Interproscan
PF00773	RNB	RNB domain	Domain	Interproscan
PF13086	AAA_11	AAA domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001900	Domain	Ribonuclease II/R	Interproscan
IPR039691	Family	Zinc finger CCCH domain-containing protein A/B	Interproscan
IPR000571	Domain	Zinc finger, CCCH-type	Interproscan
IPR041679	Domain	DNA2/NAM7 helicase-like, C-terminal	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR041677	Domain	DNA2/NAM7 helicase, helicase domain	Interproscan
IPR047187	Domain	Upf1-like, C-terminal helicase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14928	MICRO-RNA BINDING ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 7	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004540	Molecular Function	RNA nuclease activity	Interproscan
GO:0035196	Biological Process	miRNA processing	Interproscan
GO:0035198	Molecular Function	miRNA binding	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004386	Molecular Function	helicase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K25165	HELZ2; 3'-5' exoribonuclease HELZ2	EC:3.1.13.1 EC:5.6.2.6	Messenger RNA biogenesis	ko03019	deepkoala