Detailed information of CAB3976981.1 in Paramuricea clavata

Genomic Location: pcla8_s000033:116855...117961
NR annotation: CAB3976981.1, polyadenylate-binding 1-like [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
F1QB54Polyadenylate-binding protein 1A OS=Danio rerio OX=7955 GN=pabpc1a PE=1 SV=1
P29341Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2
Q9EPH8Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF00658PABPPoly-adenylate binding protein, unique domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002004DomainPolyadenylate-binding protein/Hyperplastic disc proteinInterproscan
IPR001293DomainZinc finger, TRAF-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR036053Homologous_superfamilyPABC (PABP) domainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10131TNF RECEPTOR ASSOCIATED FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03175TRAF6; TNF receptor-associated factor 6EC:2.3.2.27
Ubiquitin systemko04121deepkoala

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