Detailed information of CAB3976989.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB3976989.1, collagen alpha-1(XI) chain isoform X1, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P06684Complement C5 OS=Mus musculus OX=10090 GN=C5 PE=1 SV=2
Q91132Cobra venom factor OS=Naja kaouthia OX=8649 PE=1 SV=1
Q8IZJ3C3 and PZP-like alpha-2-macroglobulin domain-containing protein 8 OS=Homo sapiens OX=9606 GN=CPAMD8 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF01410COLFIFibrillar collagen C-terminal domainFamilyInterproscan
PF01835MG2MG2 domainDomainInterproscan
PF17790MG1Macroglobulin domain MG1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000885DomainFibrillar collagen, C-terminalInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR050938FamilyCollagen and Collagen-like Structural ProteinsInterproscan
IPR002890DomainMacroglobulin domainInterproscan
IPR041425DomainComplement C3/4/5, macroglobulin domain MG1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37456SI:CH211-266K2.1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005201Molecular Functionextracellular matrix structural constituentInterproscan
GO:0004866Molecular Functionendopeptidase inhibitor activityInterproscan

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