Gene detail

Detailed information of CAB3977173.1 in Paramuricea clavata

Genomic Location: pcla8_s000043:75618...78689
NR annotation: CAB3977173.1, uncharacterized MFS-type transporter isoform X2 [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-PACLA_8A077039

gttttcacttgtttccatctaccaaactgacattacgtcatttgatcaatttctaaagttgtttctttttggattttttaattaatttggttagggttagagttagggttgcggttagggttaggggttagagtaggggtagggtttgggctagttacatagccatttaacacctcttcaatcttctgaaaatgacgtcatgtcagttTGGTGGTTGGAAACAAGTGCTGACCTGATCAGTGATGCGCGCGCATGCGCTGTTGCGGTTTAGGCAGAATAGAATTATGGATGATTCAATTACTCTACATTAATTatacaaagaaaatatttgGGCAACGCTACCTTTGGCAACGCTTCGGTGCTGTTTTCAAAGAAAGTAATTTTTTCCTTCTCTAAAATCAGCAATCAGATCGACAATTAAGCAAAATGGAGACAGATTCTCTGTTATTTTCAAAATCGAGTAATGCTTTGGCTCAAATTGGCGAAACAACGAGCGAAGAGGAGCCGAAATTGTACAGAAGACGTTGGGTTATGTTGGCCATTTTAACCTTACTCACAGCAGAGAATTTAACTCAATGGTTGTTCTACAGTGCGATTAGCAACATTACGGAGTATCATTTTGGCGTTTCATCATTCCCAGCGCAATGTCTGTCTCTCAACAATCTCGCAATCATCATGATTTTTGGTTTACCGGCAACGTTTATTATCAACAGAACGACTCTGAAGTCTGGCATTCTGATAAGTGGCTTACTGAGTCTTATAGCTTTATGGATCAAGTTTTTCGGGGCGGGGAAAAACGGATTTGCTTTGTCATTATGCGGACAAATTTTCGCATCTGTGGGGACTTGTTTTGTACTTCCACTTCCCGCACAATTGGCTTCAATTTGGTTTGGGATATATGAGAGATCTCTTGCAACATCTATTGCTGCTAGTGGCCTGTCTGTTGGGATGGGATCAGCCTATTTATTTGCAGTTCAGTTCGTACCAGATGTTGAGAACcatacaaaaattgaagatggcATACGTAAAAGTATCCTTGTTCAAGCAATGCTGTGTTCGACAACGATTATTGCGGCAGTGATTTTGTTTGATAATGTGCCTCCATCCCCACCGAGTCCATCCCAAGCTGCAGTCAGCACAGATGAACAAGTAAGGCCACCATATCTTCATTCTTTACGAGAAGCGTTGAGCAATACCTCGTTTGTTCTAACTGGACTAACATTTGGGGCAGTTAGTGGTGTGCTTTATGCATTTTTCAGCCTACTGAGCGACATCATCCTTGACAACTATGGTGTTGATGAAGATGTGGTTGGATGGATGGGTTTCATTGGGTCAATTATCGGTATCCCTGGTATGCTCGGTGCAGGGTTCTGGCTCGATCGGACAAAGACGTATAAAAAATCATTCGTGGGATGTTCAGGTCTTATCTTCCTCACATGTTTGGGTTTTACATTAGCAGTGAAGTACAATGCACCTATAAGTGTGGTGTATGTTCTTGTTGGGTTATTTGGTTTCTTAACGGCAGCTCTAACAACCATTGGTTTCTTGCTTGGTGCCGAACTTACTTATCCCGTTCCTGAGATTGTGTCATCTGGAGCACTTTTGACAAGTGGACAGGCGTTCGGCGTTTTAGTATTGGGCATAACATCCTACACTGTAGCTGCAGTCAGTAGTGAATTTGTGAATTGGTTTATCACTGGCATATGTTTGTTTGCCTTTTTGGTTACTCCGTTCATAAAATCGGACTTCCGACGGCTTGCAGAAGATAGCATCGCATCATCAAGCACTATTGTAGCTACTAGTAGTGAAAAGGAATAAAGTGGCCCTAAAGTATTTGGGGATGGGGAAATTATTGGTTGAAGGAGGGGTGGAATATTGCATGATCGTCGGGGTGCAGATATTTTAATGGgttactgcccccccccccctatctaGAAAGTCTAACAATAAGCCAATTAGCCTAGTTCTCACAAAAAGGCCAAAATCCACCATGattttgggggtactgtctgcccttgtgaaagattctagacaattaaAACTACAACTTTAAAAAgctgtaactgtaaatttaccattatacataTTACAAACAACTATAATACAAAAAAAGTTGTGTTTCGTGGTGTGGAGACTCTCAGTGGTAGAagcagtacccccaaaatggtgGGGAAATCGtctgtgagaaaggctaattcattACGATCGTCCAAATGATGTGTTTCGTGTTGGGGTAAATTGCTGTTGAATCATAACATGTACTGTAGCTGAGACTGGAAGCAATATTTAAGTAAAAGTGCATGTCAAAGTGTTGACtactttgatatgcatattctaaCTTGTACAGTCTCGACTACATTTTATAGTGCAACTGCAATTTATCCAGACTCAGAAGATGTCATTTCGATGCACAGTGAAACCCTGAACTGGCTTATTGGTAGAAGCTGATAGTCTGCTTATTCAATGACAAAATGCAATTATTAATTGACTGCATTGTTTTGCTAGTACTTATTCCAGTGGACTTATGTTACTTTGagatatattttcaaattggCTCATCCTAAGTAAAACCTAATGATTTGCTAAGTTATAAAAGTACAAAAAGGAAGTTAGTCCATCATTGTTTTAAAGAAACCAAGAGTTCAGAATTTATGCACTGACACCAGATTATGCAACCAGCCCTAAATGGCATATAGCTGGGCATAAATTATgtacttgatatttttaatataattacaGACTCGGCAATTTAGTATTTAAAACAGATGAAGAACTTTAATAATAGTTGGgttcttttattttattttatcctTATGATGTAAAAAACACTTTGGATGTTTAATTAAGTAAATGTATGAGCAATTGCTGTTACAGTAAGATAGCTTGCATGCCATGTAAAaaagtatttaattaactaaagATTGCAATTTATCCTGAATATATATCAatcataaaatgtattattagtAATAATAGACAATGTTCAATCAAATAGCTGTTAGAAAATAAAATTGCACAATAGTTTTGAAAGTTGTGAAGCTTACTTTGAGGAAATGAGATTTCTATAGACAC

Protein

Uniprot

Uniprot term	Description
A0A0R4ILB2	Choline/ethanolamine transporter flvcr2a OS=Danio rerio OX=7955 GN=flvcr2a PE=3 SV=1
O01735	Uncharacterized MFS-type transporter C09D4.1 OS=Caenorhabditis elegans OX=6239 GN=C09D4.1 PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan
IPR049680	Family	Solute carrier family 49-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10924	MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0015232	Molecular Function	heme transmembrane transporter activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan
GO:0051184	Molecular Function	obsolete cofactor transmembrane transporter activity	Interproscan
GO:0097037	Biological Process	heme export	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08220	FLVCR, SLC49A1_2; MFS transporter, FLVCR family, feline leukemia virus subgroup C receptor-related protein	-	Transporters	ko02000	deepkoala