Genomic Location: not available for this species
NR annotation: CAB3977678.1, Nucleolar GTP-binding 2 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3977678.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q13823 | Nucleolar GTP-binding protein 2 OS=Homo sapiens OX=9606 GN=GNL2 PE=1 SV=1 |
| Q99LH1 | Nucleolar GTP-binding protein 2 OS=Mus musculus OX=10090 GN=Gnl2 PE=1 SV=2 |
| P53742 | Nucleolar GTP-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=NOG2 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001361 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08153 all species → | NGP1NT | NGP1NT (NUC091) domain | Domain | Interproscan |
| PF01926 all species → | MMR_HSR1 | 50S ribosome-binding GTPase | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR012971 all species → | Domain | Nucleolar GTP-binding protein 2, N-terminal domain | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR030378 all species → | Domain | Circularly permuted (CP)-type guanine nucleotide-binding (G) domain | Interproscan |
| IPR006073 all species → | Domain | GTP binding domain | Interproscan |
| IPR023179 all species → | Homologous_superfamily | GTP-binding protein, orthogonal bundle domain superfamily | Interproscan |
| IPR024929 all species → | Domain | Nucleolar GTP-binding protein 2, circularly permuted GTPase motif | Interproscan |
| IPR050755 all species → | Family | TRAFAC YlqF/YawG GTPases, Ribosome Maturation | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11089 all species → | GTP-BINDING PROTEIN-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005525 all species → | Molecular Function | GTP binding | Interproscan |
| GO:0005730 all species → | Cellular Component | nucleolus | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K14537 | NUG2, GNL2; nuclear GTP-binding protein | - | Ribosome biogenesis | ko03009 | deepkoala |
Transcript abundance of CAB3977678.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
