Genomic Location: not available for this species
NR annotation: CAB3978391.1, Glycosylphosphatidylinositol anchor attachment 1 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3978391.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q9WTK3 | GPI-anchor transamidase component GPAA1 OS=Mus musculus OX=10090 GN=Gpaa1 PE=1 SV=3 |
| O43292 | GPI-anchor transamidase component GPAA1 OS=Homo sapiens OX=9606 GN=GPAA1 PE=1 SV=3 |
| P39012 | GPI transamidase component GAA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=GAA1 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004822 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04114 all species → | Gaa1 | Gaa1-like, GPI transamidase component | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007246 all species → | Family | GPI transamidase component Gaa1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13304 all species → | GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR ATTACHMENT 1 PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0042765 all species → | Cellular Component | GPI-anchor transamidase complex | Interproscan |
| GO:0016255 all species → | Biological Process | attachment of GPI anchor to protein | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K05289 | GAA1; GPI-anchor transamidase subunit GAA1 | - | Glycosylphosphatidylinositol (GPI)-anchor biosynthesis | ko00563 | deepkoala |
Transcript abundance of CAB3978391.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
