Detailed information of CAB3978527.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB3978527.1, Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6PFM0Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Danio rerio OX=7955 GN=jmjd6 PE=2 SV=2
Q6GND3Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6-A OS=Xenopus laevis OX=8355 GN=jmjd6-a PE=2 SV=1
Q6NYC1Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Homo sapiens OX=9606 GN=JMJD6 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02373JmjCJmjC domain, hydroxylaseDomainInterproscan
PF00621RhoGEFRhoGEF domainDomainInterproscan
PF14604SH3_9Variant SH3 domainDomainInterproscan
PF03114BARBAR domainDomainInterproscan
PF00018SH3_1SH3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR001452DomainSH3 domainInterproscan
IPR051492FamilyDynamin-binding and Rho GEFInterproscan
IPR003347DomainJmjC domainInterproscan
IPR004148DomainBAR domainInterproscan
IPR000219DomainDbl homology (DH) domainInterproscan
IPR036274Homologous_superfamilyHR1 repeat superfamilyInterproscan
IPR027267Homologous_superfamilyAH/BAR domain superfamilyInterproscan
IPR035899Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR010504DomainArfaptin homology (AH) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22834NUCLEAR FUSION PROTEIN FUS2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0019904Molecular Functionprotein domain specific bindingInterproscan

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