Genomic Location: not available for this species
NR annotation: CAB3978531.1, fibroblast growth factor 8 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3978531.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q805B2 | Fibroblast growth factor 8b OS=Danio rerio OX=7955 GN=fgf8b PE=2 SV=1 |
| Q90722 | Fibroblast growth factor 8 OS=Gallus gallus OX=9031 GN=FGF8 PE=2 SV=1 |
| O57341 | Fibroblast growth factor 8 OS=Danio rerio OX=7955 GN=fgf8a PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001320 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00167 all species → | FGF | Fibroblast growth factor | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR008996 all species → | Homologous_superfamily | Cytokine IL1/FGF | Interproscan |
| IPR002209 all species → | Family | Fibroblast growth factor family | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11486 all species → | FIBROBLAST GROWTH FACTOR | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0008083 all species → | Molecular Function | growth factor activity | Interproscan |
| GO:0001934 all species → | Biological Process | positive regulation of protein phosphorylation | Interproscan |
| GO:0005104 all species → | Molecular Function | fibroblast growth factor receptor binding | Interproscan |
| GO:0005615 all species → | Cellular Component | extracellular space | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0008284 all species → | Biological Process | positive regulation of cell population proliferation | Interproscan |
| GO:0008543 all species → | Biological Process | fibroblast growth factor receptor signaling pathway | Interproscan |
| GO:0009887 all species → | Biological Process | animal organ morphogenesis | Interproscan |
| GO:0010628 all species → | Biological Process | positive regulation of gene expression | Interproscan |
| GO:0030154 all species → | Biological Process | cell differentiation | Interproscan |
| GO:0030334 all species → | Biological Process | regulation of cell migration | Interproscan |
CAB3978531.1.Transcript abundance of CAB3978531.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
