Detailed information of CAB3979243.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB3979243.1, E3 ubiquitin- ligase UHRF1 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families

 Sequence
No sequence record for CAB3979243.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B6CHA3E3 ubiquitin-protein ligase UHRF1 OS=Xenopus laevis OX=8355 GN=uhrf1 PE=2 SV=1
F6UA42E3 ubiquitin-protein ligase UHRF1 OS=Xenopus tropicalis OX=8364 GN=uhrf1 PE=3 SV=2
Q96T88E3 ubiquitin-protein ligase UHRF1 OS=Homo sapiens OX=9606 GN=UHRF1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001761 (this species only)
Ubiquitin familyE3|E3 activity RING|PHD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02182
all species →		SAD_SRASAD/SRA domainDomainInterproscan
PF12148
all species →		TTDTandem tudor domain within UHRF1DomainInterproscan
PF00628
all species →		PHDPHD-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003105
all species →		DomainSRA-YDGInterproscan
IPR019786
all species →		Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR011011
all species →		Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR021991
all species →		DomainUHRF1, tandem tudor domainInterproscan
IPR019787
all species →		DomainZinc finger, PHD-fingerInterproscan
IPR045134
all species →		FamilyUHRF1/2-likeInterproscan
IPR015947
all species →		Homologous_superfamilyPUA-like superfamilyInterproscan
IPR001965
all species →		DomainZinc finger, PHD-typeInterproscan
IPR036987
all species →		Homologous_superfamilySRA-YDG superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14140
all species →		E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0010216
all species →		Biological Processobsolete negative regulation of gene expression via chromosomal DNA cytosine methylationInterproscan
GO:0016567
all species →		Biological Processprotein ubiquitinationInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10638UHRF1, NP95; E3 ubiquitin-protein ligase UHRF1EC:2.3.2.27
Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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