Detailed information of CAB3979445.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB3979445.1, collagen alpha-4(VI) chain-like, partial, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A6H584Collagen alpha-5(VI) chain OS=Mus musculus OX=10090 GN=Col6a5 PE=1 SV=4
A8TX70Collagen alpha-5(VI) chain OS=Homo sapiens OX=9606 GN=COL6A5 PE=1 SV=1
Q80X19Collagen alpha-1(XIV) chain OS=Mus musculus OX=10090 GN=Col14a1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF03160Calx-betaCalx-beta domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR003644DomainNa-Ca exchanger/integrin-beta4Interproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR038081Homologous_superfamilyCalX-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007154Biological Processcell communicationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

TOP