Detailed information of CAB3979667.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB3979667.1, 40S ribosomal S21 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families

 Sequence
No sequence record for CAB3979667.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4WI01Small ribosomal subunit protein eS21 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=rps21 PE=3 SV=1
Q86CT3Small ribosomal subunit protein eS21 OS=Branchiostoma belcheri OX=7741 GN=RPS21 PE=3 SV=1
Q9SMI2Small ribosomal subunit protein eS21 OS=Cyanophora paradoxa OX=2762 GN=RPS21 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009704 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01249
all species →		Ribosomal_S21eRibosomal protein S21e FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038579
all species →		Homologous_superfamilySmall ribosomal subunit protein eS21 superfamilyInterproscan
IPR001931
all species →		FamilySmall ribosomal subunit protein eS21Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10442
all species →		40S RIBOSOMAL PROTEIN S21Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000447
all species →		Biological Processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000461
all species →		Biological Processendonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840
all species →		Cellular ComponentribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0022627
all species →		Cellular Componentcytosolic small ribosomal subunitInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02971RP-S21e, RPS21; small subunit ribosomal protein S21e-Ribosomeko03011deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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