Gene detail

Detailed information of CAB3979768.1 in Paramuricea clavata

Genomic Location: pcla8_s000243:44692...55576
NR annotation: CAB3979768.1, Sodium leak channel non-selective [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

PACLA_8A079159

ATGGAGGCTGATGCGGGTGATGGCAGTGACTTGGCAAGTGATGTTTCTAGTTCTAAAATCCCAACAAGCACTGCTGTTGAATCAAGCGGTCCTGAAGACGACGAACACGATGATGACGAACTGCCGAGTATTCAATTTGTCAAAAGTGTTTATTTTAAACGTTTAATTCAAATATCAATCGTGGTGAGTGCAATCTCAGTCGGAATGAATACTAAGAAGACGTTTGAAAAATACAGACAATTGTGGTATGTCTCTCTAACACTAGATATTTTAGTCTTAGTTTTATTTTTTATTGAATCGCTCATGGATATGAAAATGTTAGGCCTATGGAAAGGCGAGAGAGCATTTCTCAAAAATCGCTTCAATTTATTCAACTTGGCGATGTTGATATTTATTGTAATGTCCGTAGTGTTGCAAATTATCGAAGGGCCGTCTTTGTCTGGTCATGTTCCAGAATATTTAAAAATTATAGCACGGGCACCCCGCTCGTTTATTCTTATCCGAGTCATGAAATTCTTCATGAACTATTCTCTATTAAATCAGGTACGGCGTCGCTCGGGTAAACAAATCAGAAACGTTACGATATTTTTAGTATATTTCATGATTCTTGCCTCGTTAATTGGCGTTCAGCTTTTCGGAGAGGATAGCTATTATTGTGTGAAAGAAAATATTACTGACCTTACGAACGTTAACTATAAAGACTTCAATTTGCCAGAAATACGCTGTAGACATGAAAAGAGCCACGCGAATATTAATAGCACAAATTTATGTCCTAAGGGCTTTGAATGTCGAAATTTAGAGCTCTCTGATCGTCAACGAACGACTTATTTTGAAAATATCTGGTACAGTTTCTTGACCGTATACGAAAGTTCTACACAAGAGGGATGGGTTCTTGTGATGTACGCTCAAATGAACAGTCAGAATTATTACGTTAGTGCGGTTTATTTTGTGTCACTGATATTCTTTGTGGCTTGGCTTGTCAAGAGTGTTTTCATTGCTGTAATTACGGAAACATTCGCTGACTTGCGATCGCAATTGTATTTAAAAAACTGGCGCACTAATCGCCGGGTAACCGGCTTATCTTCCGAGATCATTCAAGACGACGGCACGGGTTGGCATTTGGTCGCTATTAAGGAAGAATGGACAAAAACAAAGGCTTTTAATCGTGCTAGACGATTCCTCACCTCTAAATACTTCCGCTATATGATCTGGATACTTCTGGCTTTAGACGCTATACTTCAAGCTTATTTAGAACCGCCTATACGCCGTTATCTACATCTAGTGTTTACAGTAATATTTGACATTGAGAGCTGCTTTAAAATTTGGTGTGTTGGCATAAAGAGTTACTGGAAAATCCCAGTTTATCGTTTCGAGTTATTTTTGGCCGTGGGTAGCACGCTGTGTATTGCACCAGTTGCATATGCAGAGATTGACATTTTAGTAGCTTTTCATGTTTTACGTGTGACACGTCTAATCATCGCAGTGCCTAGTTTGAACGCCTTCCTACATAAAGCATTTGGAACAGGAACTAAGATCGGTGCAGTGGTGATATTCACGTTGTTTCTGTTGGTTTTTGCATCCATTCTAAGTCTCCAGTTGTTTTCTGGCATGGATTTCGGTAGTGACAATCCGGGGCCTTTTGACGACTATCTGAAATCGTCCGAGTCTATGTTCCAAATTATTACACAAGAGGGTTGGGTTGAAGTTCTAGACACAGTAAAGTACGCGTCCTCGCCAATATTAGCCCCATTTGTCAGTATTTACTTTACTAGCTACAACCTCTTTGCATCGCTTATCCTTGGCAGCGTTTTCATTGCTGTTATTCTTGATAATTTGGAAATTAAAGAAGAAACAAAAATATTGAAACAACGTAAATTGGGAGAAGAAGGTTTGAATATTCAAGAAAGTTTGCCCAAGCGACTTCAAATATTTGGAAAGTTTAAAGAAAGTCCGAGGTTAGTGGAAACCTGGAAGGCTTCTGGTGACTTTCCTGTTCCTAAAGTTCGTCAGAGTTTCATGAGAAGGTTTTTGGACGATTCACGAATGCGATTGTCCCGTTTTACAGCCAACCCCAGTGTGTATGAAGATGCATTAATGACACAAAGAAAGGACATGCCCTTCAAATTACTAAGTTCTCCCGTTCGTGATGATGTTCACACTCTAAGATTGAAGAAAAGAACTAGTCTAACACAACTTATTCAAGATTCAACGCGAAGACGCAATCTTACGGATCACACGGCAACACAGGGCAGGCACACAGCTAAGTCATATCTCTTAGGTTATACAGCACGGCAGATAAATCGGAACGCGGCCAAGTTAACACAAGGTGCACGCAAGACATCAGAAAGAGCGGACATGAATGCACTGCGACAAATGAAGAGTCAAGGTGGACAAGGCACTGCAACTTTACCTCACAATACAGCTGGAGCTCGAAACAACGAAGACTGGAACATAAAAGAGTTGCGAGCCCGACGTGAACAAGCACAAAGAGTAAAAGCTGCGCACGAGGAATCTCTACGCGAAAACCATCCTTACTTTGATTTCCCGCTTTTCCTTGTATCACGTGACAGTCTTTTACGTCAATGGCTACAACGCATTGTTCATGCTCGGTACGAGATCGCAGGGAATCATGGGGAGGTTCAGTCCAAACGACCCATGATTAATGATGCTTTTATCAAGAGAGTTTTATCAACTCAAACCTATTTAGAATGGGTTATTATTCTTATCACATTTTCATCCTGTGTTGCAATGATGTTTGAGAAACCACATAGTCGACGGACATTCGATGATCCTGTTCTTAAATTCTTTGAGTATCTCTTCGTTGTTTCCACAAGTCTCGAGTTGCTGATTCGTGTTCTCGCTGATGGGCTGTTGTTCACGCCTAATGCCGTTATACGAAGCTTTGGTGATGTTATAGATTTATCTATTTATCTGATTGGCTTTATCTATATCTGTGTATCGCCGACGTTCATCCAACGGAATTCACCAGCTTACGCACTCCTGGTTCTCCGTGCCCTGAGACCACTGAGAGTGATTAACCTCATTCCAAAAATGAGGCAAGTCATTCAGGAATTGATTGGTGGGTTCAAAGAAATCCTAAAGGTTGCAGCTCTACAATTAGTATTGATGTTCATCTTTGCAAGCTATGGTGTACAGATGTTTTCTAATAAACTTAAGAGATGTAACGATGAGAACATTAAAACTGAGGAGGAGTGCACTGGAGTGTTCTTCACAACGCTGAAAGGGCCACGTGAAATGAGGGACTTAGCCGGCGATGAAAACGAAATGTTGGTTTCAAGGGTGTGGCATAATCCAAAAAATTTCAACTTTGACAATATGTCTCGCGCATTGTTGGCTTTATTCGAGGCACTCTCGCTGGAGGGTTGGCTAGATATAAGAAATGTTATTGAAAATCAAAAGGATCTGGGAACATTGTATGGCTTTTATATTCATGGCTACGTTTTACTTGCCTGCATGATCGGGCTGGCACTCTTTGTCGGTGTTATAGTTAATAATTTTAACGAGAACAAAGGAACAGCGCTACTTACTGTTGATCAAAGAAGATGGGAAGATTTAAGAAAGAGACTACGGCTTGCTCAGCCTCTTCATCTCCCATTGCGTCCTGATGACAGTCCTGTTAGATCTAGACTATACGACTTGTTACAATCTACACATTATGGTCGAGTGAACGTTATCCTGGTTGTTCTAAACTGTGCAACTCTGGCGGTTGTACCATGGATTGTCGAGCCTGGTTCTCCGACTCCGAAGTCTTTGATGTTAACTTCCGTGGTATTGACTATTCTATTTGTGATTGAATGTTTTCTCAAGATTATTGCATACACTTTCAGGGGTTATTGGAGAAGTCATCGCAACCGTTTTGACTTTTTTCTTACTTTAGTTGGTGTAGTGTGGATTATACTTCATATTGCTTTCGTTCACAATCATGATCATGACAAAACCTACAACGGGACGGTTTGGTTAGGTGTTGGGATAATCTTGTTTCGGTTCCTCAGTCTATCTGGCAAACACGATACGTTAAAGATGTTAATGATGACAGTCTCTATGAGTTTAGTCAAGAGTTTCTATATTATATTCGTCTTGTTATTAATCATAATGTCATACGCAATGGTTGGGGTCATTGTGTTTGGTACTGTGAAACATGGCGTCGCTATAAACCGCGATGCAAACTTTGAAGGCAGTATTAATGCAATGATAACGTTATTCAGGATAACAACTGGCGAAGATTGGAATAAAATAATGCAAGATTGTGGGATACAAGAACCTTACTGTACCGAGGCAACTGAATTTGAGAATTACTGGAAATCTGATTGTGGGAGTTATGTTGGATCACATTGTTACTTTATATCATTCTACGTGATCTTAACGTTTGTTTTATTAAATTTACTGATTGCGGTGATTATTGAGAACTTCTCTTTGTTCTACTCGAGTGAAGAGGACGCAGCTTTGAGTCATCAAGATTTATATCAGTATCAGTTGACTTGGAATCTCGTTGATCAAAATCGTAAAGGATTAATAACAGTTCGTCAAGCTAGATTAATTTTACGTTTGTTACGGGGAAGACTTGGGGTGGATCCTTCCACGTTCCTATTTAAACATATTTGCTTGGAGATTGAAAAGTTTCGAGGTGGACGTGAAGTGTCTTTCCACGACTTGTTGGAAATTCTGGCTTACCGATCAATTGACGATATATCTCGAAGTTTACAGCTTGAGGATTTGCTGGCTCGTGAGGAACTTGAACGGTCGATTGAGGAAGAAGTAGCTATACAAACTATACGTGACTGGTTTTTGAACCTTAAGAAGGAGAAAGCTGTAAAATGCGGGCGTGGGTACTCGTTCGGCGGAGTAAGTTCGGCGTCGAGTGTTGAAACTGAATCAAGTGATGAGGAAGTTCAGGATCAACCTAACAGACTGTCCGTAAAAGGGTTACAAAAACGAAGTACGAGTTCGAAAACGTCAACGCCATCTATTGCTGTTGTTAATGATGAACCTCAAGCAGAAGCGAAGGAGGAACAAAAAGATGAAACACAACTAGATGAATGGTTTACGAATCAAAGAAAATTATGA

Transcript

rna-PACLA_8A079159

gtaaacaaagcaaaatggAGGCTGATGCGGGTGATGGCAGTGACTTGGCAAGTGATGTTTCTAGTTCTAAAATCCCAACAAGCACTGCTGTTGAATCAAGCGGTCCTGAAGACGACGAACACGATGATGACGAACTGCCGAGTATTCAATTTGTCAAAAGTGTTTATTTTAAACGTTTAATTCAAATATCAATCGTGGTGAGTGCAATCTCAGTCGGAATGAATACTAAGAAGACGTTTGAAAAATACAGACAATTGTGGTATGTCTCTCTAACACTAGATATTTTAGTCttagttttattttttattgaatCGCTCATGGATATGAAAATGTTAGGCCTATGGAAAGGCGAGAGAGCATTTCTCAAAAATCGCTTCAATTTATTCAACTTGGCGATGTTGATATTTATTGTAATGTCCGTAGTGTTGCAAATTATCGAAGGGCCGTCTTTGTCTGGTCATGTtccagaatatttaaaaattatagcaCGGGCACCCCGCTCGTTTATTCTTATCCGAGTCATGAAATTCTTCATGAACTATTCTCTATTAAATCAGGTACGGCGTCGCTCGGGTAAACAAATCAGAAACGTTACGATATTTTTAGTATATTTCATGATTCTTGCCTCGTTAATTGGCGTTCAGCTTTTCGGAGAGGATAGCTATTATTGTGTGAAAGAAAATATTACTGACCTTACGAACGTTAACTATAAAGACTTCAATTTGCCAGAAATACGCTGTAGACATGAAAAGAGCCACGCGAATATTAATAGCACAAATTTATGTCCTAAGGGCTTTGAATGTCGAAATTTAGAGCTCTCTGATCGTCAACGAACgacttattttgaaaatatctgGTACAGTTTCTTGACCGTATACGAAAGTTCTACACAAGAGGGATGGGTTCTTGTGATGTACGCTCAAATGAACAGTCAGAATTATTACGTTAGTGCGGTTTATTTTGTGTCACTGATATTCTTTGTGGCTTGGCTTGTCAAGAGTGTTTTCATTGCTGTAATTACGGAAACATTCGCTGACTTGCGATCGCAATTGTATTTAAAAAACTGGCGCACTAATCGCCGGGTAACCGGCTTATCTTCCGAGATCATTCAAGACGACGGCACGGGTTGGCATTTGGTCGCTATTAAGGAAGAATGGACAAAAACAAAGGCTTTTAATCGTGCTAGACGATTCCTCACCTCTAAATACTTCCGCTATATGATCTGGATACTTCTGGCTTTAGACGCTATACTTCAAGCTTATTTAGAACCGCCTATACGCCGTTATCTACATCTAGTGTTTACAGTAATATTTGACATTGAGAGCTGCTTTAAAATTTGGTGTGTTGGCATAAAGAGTTACTGGAAAATCCCAGTTTATCGTTTCGAGTTATTTTTGGCCGTGGGTAGCACGCTGTGTATTGCACCAGTTGCATATGCAGAGATTGACATTTTAGTAGCTTTTCATGTTTTACGTGTGACACGTCTAATCATCGCAGTGCCTAGTTTGAACGCCTTCCTACATAAAGCATTTGGAACAGGAACTAAGATCGGTGCAGTGGTGATATTCACGTTGTTTCTGTTGGTTTTTGCATCCATTCTAAGTCTCCAGTTGTTTTCTGGCATGGATTTCGGTAGTGACAATCCGGGGCCTTTTGACGACTATCTGAAATCGTCCGAGTCTATGTTCCAAATTATTACACAAGAGGGTTGGGTTGAAGTTCTAGACACAGTAAAGTACGCGTCCTCGCCAATATTAGCCCCATTTGTCAGTATTTACTTTACTAGCTACAACCTCTTTGCATCGCTTATCCTTGGCAGCGTTTTCATTGCTGTTATTCTTGATAatttggaaattaaagaagaaacaaaaatattgaaacaacgTAAATTGGGAGAAGAAGGTTTGAATATTCAAGAAAGTTTGCCCAAGCGACTTCAAATATTTGGAAAGTTTAAAGAAAGTCCGAGGTTAGTGGAAACCTGGAAGGCTTCTGGTGACTTTCCTGTTCCTAAAGTTCGTCAGAGTTTCATGAGAAGGTTTTTGGACGATTCACGAATGCGATTGTCCCGTTTTACAGCCAACCCCAGTGTGTATGAAGATGCATTAATGACACAAAGAAAGGACATGCCCTTCAAATTACTAAGTTCTCCCGTTCGTGATGATGTTCACACTCTAAGATTGAAGAAAAGAACTAGTCTAACACAACTTATTCAAGATTCAACGCGAAGACGCAATCTTACGGATCACACGGCAACACAGGGCAGGCACACAGCTAAGTCATATCTCTTAGGTTATACAGCACGGCAGATAAATCGGAACGCGGCCAAGTTAACACAAGGTGCACGCAAGACATCAGAAAGAGCGGACATGAATGCACTGCGACAAATGAAGAGTCAAGGTGGACAAGGCACTGCAACTTTACCTCACAATACAGCTGGAGCTCGAAACAACGAAGACTGGAACATAAAAGAGTTGCGAGCCCGACGTGAACAAGCACAAAGAGTAAAAGCTGCGCACGAGGAATCTCTACGCGAAAACCATCCTTACTTTGATTTCCCGCTTTTCCTTGTATCACGTGACAGTCTTTTACGTCAATGGCTACAACGCATTGTTCATGCTCGGTACGAGATCGCAGGGAATCATGGGGAGGTTCAGTCCAAACGACCCATGATTAATGATGCTTTTATCAAGAGAGTTTTATCAACTCAAACCTATTTAGAATGGGTTATTATTCTTATCACATTTTCATCCTGTGTTGCAATGATGTTTGAGAAACCACATAGTCGACGGACATTCGATGATCCTGTTCTTAAATTCTTTGAGTATCTCTTCGTTGTTTCCACAAGTCTCGAGTTGCTGATTCGTGTTCTCGCTGATGGGCTGTTGTTCACGCCTAATGCCGTTATACGAAGCTTTGGTGATGTTATAGATTTATCTATTTATCTGATTGGCTTTATCTATATCTGTGTATCGCCGACGTTCATCCAACGGAATTCACCAGCTTACGCACTCCTGGTTCTCCGTGCCCTGAGACCACTGAGAGTGATTAACCTCATTCCAAAAATGAGGCAAGTCATTCAGGAATTGATTGGTGGGTTCAAAGAAATCCTAAAGGTTGCAGCTCTACAATTAGTATTGATGTTCATCTTTGCAAGCTATGGTGTACAGATGTTTTCTAATAAACTTAAGAGATGTAACGATGAGAACATTAAAACTGAGGAGGAGTGCACTGGAGTGTTCTTCACAACGCTGAAAGGGCCACGTGAAATGAGGGACTTAGCCGGCGATGAAAACGAAATGTTGGTTTCAAGGGTGTGGCATAATccaaaaaatttcaactttgACAATATGTCTCGCGCATTGTTGGCTTTATTCGAGGCACTCTCGCTGGAGGGTTGGCTAGATATAAGAAATGTTATTGAAAATCAAAAGGATCTGGGAACATTGTATGGCTTTTATATTCATGGCTACGTTTTACTTGCCTGCATGATCGGGCTGGCACTCTTTGTCGGTGTTATAGTTAATAATTTTAACGAGAACAAAGGAACAGCGCTACTTACTGTTGATCAAAGAAGATGGGAAGATTTAAGAAAGAGACTACGGCTTGCTCAGCCTCTTCATCTCCCATTGCGTCCTGATGACAGTCCTGTTAGATCTAGACTATACGACTTGTTACAATCTACACATTATGGTCGAGTGAACGTTATCCTGGTTGTTCTAAACTGTGCAACTCTGGCGGTTGTACCATGGATTGTCGAGCCTGGTTCTCCGACTCCGAAGTCTTTGATGTTAACTTCCGTGGTATTGACTATTCTATTTGTGATTGAATGTTTTCTCAAGATTATTGCATACACTTTCAGGGGTTATTGGAGAAGTCATCGCAACCGTTTTGACTTTTTTCTTACTTTAGTTGGTGTAGTGTGGATTATACTTCATATTGCTTTCGTTCACAATCATGATCATGACAAAACCTACAACGGGACGGTTTGGTTAGGTGTTGGGATAATCTTGTTTCGGTTCCTCAGTCTATCTGGCAAACACGATACGTTAAAGATGTTAATGATGACAGTCTCTATGAGTTTAGTCAAGAGTTTCTATATTATATTCGTCTTGTTATTAATCATAATGTCATACGCAATGGTTGGGGTCATTGTGTTTGGTACTGTGAAACATGGCGTCGCTATAAACCGCGATGCAAACTTTGAAGGCAGTATTAATGCAATGATAACGTTATTCAGGATAACAACTGGCGAAGATTGGAATAAAATAATGCAAGATTGTGGGATACAAGAACCTTACTGTACCGAGGCAACTGAATTTGAGAATTACTGGAAATCTGATTGTGGGAGTTATGTTGGATCACATTGTTACTTTATATCATTCTACGTGATCTTaacgtttgttttattaaatttacTGATTGCGGTGATTATTGAGAACTTCTCTTTGTTCTACTCGAGTGAAGAGGACGCAGCTTTGAGTCATCAAGATTTATATCAGTATCAGTTGACTTGGAATCTCGTTGATCAAAATCGTAAAGGATTAATAACAGTTCGTCAAGCTAGATTAATTTTACGTTTGTTACGGGGAAGACTTGGGGTGGATCCTTCCACGTTCCTATTTAAACATATTTGCTTGGAGATTGAAAAGTTTCGAGGTGGACGTGAAGTGTCTTTCCACGACTTGTTGGAAATTCTGGCTTACCGATCAATTGACGATATATCTCGAAGTTTACAGCTTGAGGATTTGCTGGCTCGTGAGGAACTTGAACGGTCGATTGAGGAAGAAGTAGCTATACAAACTATACGTGACTGGTTTTTGAACCTTAAGAAGGAGAAAGCTGTAAAATGCGGGCGTGGGTACTCGTTCGGCGGAGTAAGTTCGGCGTCGAGTGTTGAAACTGAATCAAGTGATGAGGAAGTTCAGGATCAACCTAACAGACTGTCCGTAAAAGGGTTACAAAAACGAAGTACGAGTTCGAAAACGTCAACGCCATCTATTGCTGTTGTTAATGATGAACCTCAAGCAGAAGCGAAGGAGGAACAAAAAGATGAAACACAACTAGATGAATGGTTTACGAATCAaagaaaattatgaaaaaggtgAATTTAATGTAGGACATGATAGACAAATATTTATGAAGTAACTTTGTGGGGGATTTGCTATAACTTGCGCTGTTTAAGCAGGGATTTATACAAACACTTTTCTGCTATCGGTATATGGTAGTAAAATCTCAGTCTTCAAACCCAATCTTTCTCCGTATTTAAATTTTTCACACAGTTATACTTTGAAGAAATTGTGGCAAATGTGAACAATTCATTGTAAATGGAAGAAAGTAATTGATCGTTGGCGTTGTATATTCATTTCCATCTCCattaaaaacttgttttaaaacGATTATATTTTTGCTCAAAAGTGCTGTCTGAATGTCTCGTACTAAAACTCAATCTTCGTCCGAGAAAATGTTTGTATAAATCTATGTATAAGGATAGCCTATGTCGTTCTTGTCATCATTATTGCATTTCATGATCTTGATCTAACTAGTCATGCATCCAAGTTCTCAGATATTGTACTCAAGCTAACAGAATGAGAAttaaagcccgttttccactaagCTACTGTTTCCTTTGTCGACATCGCTTTTGCAAagcgcttcgcgcgaacaaattcgcgtagtggaaTCCGACTCAGTGTCGATTTCAGGTCACTTTCAAAGCGCGTTttcaagtttgttttaaatattcctAAGTTCATTTCtaaatggacctattccctaatgaacaaaattttgatctagacaagtctatcacaaaattagtaatattccgaagttttgttgcgaaattttgtaaaatgtggataatatagccctgcgaagtttgcgtttttcagtcattttgtattacgcacgggaaattgatatcACTTTCTGAAAAAatgtatcaatttcccgcgcgtaatacaaaatgactgaaaaactgcaaacttcgcagggctatatattttccgcattttacaacatttcacaacgaaacttcggaatattactaattttgtgatgctctttcgagctgtgatgaaatttttgtctagatcaaaattttgttcattagggaataggtccattgggCGTGGAACTTGCACAGCCAACTTCGCAAGTTGCTTTAATACTAAAGTGCCGAAATATACTCAACTAGAGTACCGAAGTACTGAACGTAAACTCGTAATTTGCAGTGTACCATTACAGCCAACGAATTAAACATATTTCTTAAaagctttttaattaaaataattaaattgtcaaatttgtTGGCTATATTAGTAAAACACTGCAAATTACGAGCTTATGTTCAGTACTTCAGTACTTTAGTTGAGTACTTCAGCACTTGAGTAAGCAACTTGTGAAGTTGGCTTTGCAAGTTCCACGCCATATTGCAAATTTAGAAACGTCATTGGGAATATTCACGTACACAACAAACTTAGGATTCGCGATCTAAAAAGTGATCTGAAATCAGCAActtaatttaagaaatgttcGCGCATGAGTTTTACTAAACATGAGGCCGGAGACAACGCCCGTACACATTTCTTGAAAACAGGTTATTAGTTGCGGAAGgctgcaattttgttgctggtataTGTTTCTTCACCTTAAAACGGCAATTAGAGCGAGATGGCCTATCCTAGATAATCGCCCGAGTTCAAGCAAATCCCACTTTATGACTGCATGGGAGTTTTTACATGAGATAATCATTGCTTTATGTAACTGTGaaataaaaaacaacatttcaagcAAAGGCCTATTTCCATGAGAAACTGGTTGACGAAATTGCTCATTGGGGGAATACGGTTGTCTGCCTACACACCAGGGCCtgggttgtacgaaggccggtaCCCAGATTAAACTTTACTCTTTAGTATTTAGATATCAAAGTTTCGTTttattacagttgatttcacgaaacgttGGCCACGCCAAttgcgaggttggttgggaatttgggaactataaacacggatcatcaagttgattggaaaccggccaatcaaattcgaaagtttcgcatcaaattatcgaaattcgttatgaaatgccgaaccaagttcgcaagcaagttcgcaaattgcaaacgattttgacggtaaattttaaaaactaaacttattgtattaaacttattataattttaaacttgaaattattattattattatattatttattgttaaatgaataagtttagtttttaaaatttaccgtcaaaatcgtttgcaatttgcgaacttgcttgcgaacttggttcggaatttcataacgaatttcgataatttgatgcgaaacttccgaatttgattggccggtttccaatTAACTTGATCATCTTGTGTTTATAGctcccaaattcccaaccatCTCGCAACTGGCGTGGCCAAActttcgtgaaatcaactgtattTGTGACGTCCATATATCCATAGTTTCATagcttttcaagcatttttaaaCGGTTCATAAAATCACTATATATACCCGGCTATCCACCCTTCGTACAACTGGGCCCAGACGATGGGCCCTTGCTGGAAatgttttttataaatatatcatttttaaGGTAGACGAGAGTTATGTAGCCGTTGGTaaaaaaaattagcaagtaCGCGCGTTTTgctcgtctgtatgggtcaaaagacaaaaaagaaaatttgtTCGGCGGTTTTAGTAGCTACAATAACCATAGCTGCCAGAACACTGAACATTTGTCATAAGTAGTAGTGATAGAAAATCTGTTTTACGTACAGGTGTAATTAGCAAATACAACTTGGCATTACAGACAACTTGTTTGTCTGTTGCAGGCTTAAACCTGCCGCACATGAGAAACTTGCAGAGCTAACCGCCTCGTGTGGCAGCTAACTCAGCTATGAATTTTCACCACACACGTTGGGAAACTATACTCAACAGGAATATCGTTGATAAGATCGTTTGCATTCCCTCCATTATCGCCATTTTGACCAAAGTCACGTGAAGAAACTATGGGTTCTCATTTGCCAGttaattgaccacttgcgtaatagactaaattttgatctcaacaaaaatttcatcacagcttgaaagagcatcaaaaaattagtaatattccaaagtttcgttgcgaaatgttgtaaaatgcggaaaatatagccttgcgaagtttgcaattttcagtcattttagattacaaacgggaaattgacagcccaataccctttggggctgtcaatttcccgtttgtaatacaaaatgactgaaaattgcaaacttcgcaaggctatattatccgcattttacaacattttgcaacaaaactttggaaaattactaattctgtgatgctctttcaagctgtgatgaaatttttgtctagacttgttgagatcaaaacttagtctattacgcaaatggtcaattcaaGCAGCTCAGCACTGAGCTCGCAACATTTTTTTCGCAAAGACGAtccgatagatattttcctcaggGTCTCAAGCATCTCAAGAGGTATTATTAAGTAGCTCAGCAAGCTTCTCTCGTGTGCAGCAGGCTTTAAATAATGAAACTGTGGATTTCAATCCTCGCCAGCTTGAAAAGAAAAAAGGCGTTTCAAGCCACGGCTGTCATTGTAACTGGAAATTAGTAGGACGAACTATACTTACGAATGACCGTCGCTTGAAACGTCCACGTATGATCTAATTACTGATGAGTAACAACATCAACATTCATCAACATGGTTTCCTTTCTGACCTTAGAGTCAATAAATGGTATTAAATGCCAAAGTTGTCATTCAAAAATAAGAGTTTCTCACCAGGGACTGGTTGTACGAAAGCCAGGATAGCGGTATCCACGTGATAGTGATCCTCTCAAACTTTCTAAAAACTACCCGTTCATAAGCCTTCTAGAATTTCATACGGGGCCGTCTGAAATTCTACCTATACATTGATTAAATAGACcgtatgcataatgacgtcacaaggcttgatgcccgcgaggaatgctggtcttcgtagtcatcgcccaggaaaatttcgatactggccatttttaattgtttaattttcttggGCGCTGACTACTAAccccagcattcctcgcgggcatcaagccttgtgacgtcattatgcataaggtctattaaaataaagtttcatTCTATTTTTAACTGCAAGTTCGATCTCCGTAGACTTTTTAcaacggttgaaaaaatcactatccggtgggtAGTGCTATATGGCATTCGTATACAACCACCCCTGGTGTGTAGTGCTATTTCATTTTGTCACTTTGAGTAAGGCAACTCTTCTGCTTTCTTACACAGAGCCATGTTAACATGCAGTACTTACATAAAAATGGTGAACATGGCCCCCATTTGGACCTCaggtcacttttcaacgcgcatttcctaaagccctgggcaaactagaaaacattgttgcggaaacattctttcctaccaatgtttccccatgtttcccagagtggccAAACACTatgaaacattagtgagaaacatagggaaacatcaaatgtttctgtatttgctaggaaacatttttgcttctcgggaagcaaattttgtttccgcaacaatgtttccacgggtgggcaaacagggaaacatttgaggaaacatcgagaatcacaaatgtttccacaacaatgtttcctagtttgcccagggcttaagttTGTTGCGAACATGGCAAATTTCCAAGTTTGGGCATGAACTTCGCAaaaaagttcgcaagttcatttcactGTTTGAACTTCCATGATTGTAACAAATGTTCACAGtgcaagttgaaattaacaattcatTTGAAAGTTCTTGGTTGGTCTCCAAAgaaagtttgtatttcaaattggttattattatcaTCGAGTTattgaacatttgtttacaaacgaagttcaaacattgcgaacttcgttgcgaagttcacgcccaattttcgaacttggaaacgtaattggcaagtacGAAAAGTGACTTGACAATAAATAGACGATTCACCACGAATGctttttacataatttggaGATAAGAAATTTCGTTGCGAGTTGCAGGAAAACTGGCTTCGTCTACGTAAGCATTTTCTTAGTTTTCGATTGAGAGTTCAAAAACCAGAGAAGTTCATTACGTTTCAGTATGACTAAACGGAAAACAGGCTTAACAAAAACAGTTCGTTTCGCCAAGATACCGATACTGCAGATGGCagacaaaatattaaatatcaaTCTATACATTTAGTAGcaaattttttaattgataagtTATGTTGGATTTCAGGTCAATTTCTATGGGAATGGCATGGTAAAAAAGATGTACTAAATAAATGAATAAGAATTTATATTTAACTTATTAAATGGTAATAACATTTTATTGTaattctgaaatattttaaccTCCTCGACTTTTAGTTAATTGACCGGTTTAGACGTTTTATTGTTGCTAAGATTCCATGCACGTTTTCAATTCTTGCCAGGGATTCCTCTACCGGCCCAGTTTGATCATTCTGCAGTGCGCAAATAATTCATTTCAAATTTTATGACTTGGATAACGTGTCTATATCTCGCTGTTTAGTCTTAATCCTAACTCTATTTGACCCGACCTCAATTGGTGGATACAGCAAGTGCCTATAGTCATTATAGCTTGGGGCCTTTGTGGATCGTTGGCTCTTTTGAGACCGGTTAATAAAAGCCAACTGCAGATAGGTAAGCAATTTTAACCGTGTGAAGCATTCATTTGACCAAGTGGGCTAAATAGCCCAGTGTTGTTGACCAAGGGGGCTATAGCTTAGTGGGCATGGCCTGCGTTCaactttattaatattttgcacACCTATCATAC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BXR5	Sodium leak channel NALCN OS=Mus musculus OX=10090 GN=Nalcn PE=1 SV=2
Q6Q760	Sodium leak channel NALCN OS=Rattus norvegicus OX=10116 GN=Nalcn PE=1 SV=1
Q8IZF0	Sodium leak channel NALCN OS=Homo sapiens OX=9606 GN=NALCN PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007069 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00520 all species →	Ion_trans	Ion transport protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027359 all species →	Homologous_superfamily	Voltage-dependent channel domain superfamily	Interproscan
IPR028823 all species →	Family	Sodium leak channel NALCN	Interproscan
IPR005821 all species →	Domain	Ion transport domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46141 all species →	SODIUM LEAK CHANNEL NON-SELECTIVE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005261 all species →	Molecular Function	monoatomic cation channel activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0032224 all species →	Biological Process	positive regulation of synaptic transmission, cholinergic	Interproscan
GO:0032230 all species →	Biological Process	positive regulation of synaptic transmission, GABAergic	Interproscan
GO:0005216 all species →	Molecular Function	monoatomic ion channel activity	Interproscan
GO:0006811 all species →	Biological Process	monoatomic ion transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K21863	NALCN; sodium leak channel non-selective protein	-	Ion channels	ko04040	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of CAB3979768.1 across 21 RNA-seq samples of Paramuricea clavata. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

21Samples

17TPM > 0

4Conditions

5.2Max TPM

2.5Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
apical branchlet · Control at T25	6	5	2.45	5.14
apical branchlet · Temperature treatment at T0	6	4	1.18	2.00
apical branchlet · Temperature treatment at T25	5	5	3.99	5.15
apical branchlet · Control at T0	4	3	2.60	3.87

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR19977439	apical branchlet · Control at T25	apical branchlet	not recorded	Control at T25	SRP384900	5.14
SRR19977444	apical branchlet · Control at T25	apical branchlet	not recorded	Control at T25	SRP384900	3.04
SRR19977440	apical branchlet · Control at T25	apical branchlet	not recorded	Control at T25	SRP384900	2.58
SRR19977441	apical branchlet · Control at T25	apical branchlet	not recorded	Control at T25	SRP384900	2.16
SRR19977455	apical branchlet · Control at T25	apical branchlet	not recorded	Control at T25	SRP384900	1.76
SRR19977433	apical branchlet · Control at T25	apical branchlet	not recorded	Control at T25	SRP384900	0.00
SRR19977427	apical branchlet · Temperature treatment at T0	apical branchlet	not recorded	Temperature treatment at T0	SRP384900	2.00
SRR19977437	apical branchlet · Temperature treatment at T0	apical branchlet	not recorded	Temperature treatment at T0	SRP384900	1.85
SRR19977428	apical branchlet · Temperature treatment at T0	apical branchlet	not recorded	Temperature treatment at T0	SRP384900	1.82
SRR19977438	apical branchlet · Temperature treatment at T0	apical branchlet	not recorded	Temperature treatment at T0	SRP384900	1.43
SRR19977426	apical branchlet · Temperature treatment at T0	apical branchlet	not recorded	Temperature treatment at T0	SRP384900	0.00
SRR19977436	apical branchlet · Temperature treatment at T0	apical branchlet	not recorded	Temperature treatment at T0	SRP384900	0.00
SRR19977434	apical branchlet · Temperature treatment at T25	apical branchlet	not recorded	Temperature treatment at T25	SRP384900	5.15
SRR19977463	apical branchlet · Temperature treatment at T25	apical branchlet	not recorded	Temperature treatment at T25	SRP384900	4.64
SRR19977425	apical branchlet · Temperature treatment at T25	apical branchlet	not recorded	Temperature treatment at T25	SRP384900	4.04
SRR19977432	apical branchlet · Temperature treatment at T25	apical branchlet	not recorded	Temperature treatment at T25	SRP384900	3.47
SRR19977435	apical branchlet · Temperature treatment at T25	apical branchlet	not recorded	Temperature treatment at T25	SRP384900	2.63
SRR19977445	apical branchlet · Control at T0	apical branchlet	not recorded	Control at T0	SRP384900	3.87
SRR19977446	apical branchlet · Control at T0	apical branchlet	not recorded	Control at T0	SRP384900	3.73
SRR19977443	apical branchlet · Control at T0	apical branchlet	not recorded	Control at T0	SRP384900	2.78
SRR19977442	apical branchlet · Control at T0	apical branchlet	not recorded	Control at T0	SRP384900	0.00

Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM, StringTie quantification over 21 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.