Detailed information of CAB3979866.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB3979866.1, lysosome-associated membrane glyco 1-like [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

 Sequence
No sequence record for CAB3979866.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P11438Lysosome-associated membrane glycoprotein 1 OS=Mus musculus OX=10090 GN=Lamp1 PE=1 SV=2
P49129Lysosome-associated membrane glycoprotein 1 OS=Cricetulus griseus OX=10029 GN=LAMP1 PE=2 SV=1
P14562Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002080 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21222
all species →
Lamp2_2ndLysosome-associated membrane glycoprotein 2, transmembrane segmentDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002000
all species →
FamilyLysosome-associated membrane glycoproteinInterproscan
IPR048524
all species →
DomainLysosome-associated membrane glycoprotein 2-like, transmembrane domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11506
all species →
LYSOSOME-ASSOCIATED MEMBRANE GLYCOPROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005765
all species →
Cellular Componentlysosomal membraneInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0031902
all species →
Cellular Componentlate endosome membraneInterproscan
GO:0072594
all species →
Biological Processestablishment of protein localization to organelleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB3979866.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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