Detailed information of CAB3980166.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB3980166.1, kalirin isoform X1, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P97924Kalirin OS=Rattus norvegicus OX=10116 GN=Kalrn PE=1 SV=3
A2CG49Kalirin OS=Mus musculus OX=10090 GN=Kalrn PE=1 SV=1
O60229Kalirin OS=Homo sapiens OX=9606 GN=KALRN PE=1 SV=3
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00041fn3Fibronectin type III domainDomainInterproscan
PF00169PHPH domainDomainInterproscan
PF00621RhoGEFRhoGEF domainDomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF00018SH3_1SH3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003961DomainFibronectin type IIIInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR001452DomainSH3 domainInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR051336FamilyRho GTPase-activating Guanine Nucleotide Exchange FactorsInterproscan
IPR001331Conserved_siteGuanine-nucleotide dissociation stimulator, CDC24, conserved siteInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR000219DomainDbl homology (DH) domainInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR035899Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22826RHO GUANINE EXCHANGE FACTOR-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0019898Cellular Componentextrinsic component of membraneInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan

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