Gene detail

Detailed information of CAB3980810.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB3980810.1, Hypothetical predicted protein [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A1Z713	Intermembrane lipid transfer protein Vps13 OS=Drosophila melanogaster OX=7227 GN=Vps13 PE=1 SV=2
Q96RL7	Intermembrane lipid transfer protein VPS13A OS=Homo sapiens OX=9606 GN=VPS13A PE=1 SV=2
Q709C8	Intermembrane lipid transfer protein VPS13C OS=Homo sapiens OX=9606 GN=VPS13C PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06650	VPS13_VAB	Vacuolar-sorting associated protein 13, adaptor binding domain	Domain	Interproscan
PF16909	VPS13_DH-like	Vacuolar-sorting-associated 13 protein, DH-like domain	Family	Interproscan
PF21679	VPS13_C	Intermembrane lipid transfer protein VPS13, C-terminal	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF09333	ATG2-VPS13_C	ATG2/VPS13, C terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026847	Family	Vacuolar protein sorting-associated protein 13	Interproscan
IPR009543	Domain	Vacuolar protein sorting-associated protein 13, VPS13 adaptor binding domain	Interproscan
IPR031645	Domain	Vacuolar protein sorting-associated protein 13, DH-like domain	Interproscan
IPR049424	Domain	Intermembrane lipid transfer protein VPS13, C-terminal	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR015412	Domain	Atg2/VPS13, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16166	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006623	Biological Process	protein targeting to vacuole	Interproscan
GO:0019898	Cellular Component	extrinsic component of membrane	Interproscan
GO:0045053	Biological Process	protein retention in Golgi apparatus	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19525	VPS13A_C; vacuolar protein sorting-associated protein 13A/C	-	Membrane trafficking	ko04131	deepkoala