Genomic Location: not available for this species
NR annotation: CAB3980848.1, ---NA--- [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3980848.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q3LHL9 | Protein winged eye OS=Drosophila melanogaster OX=7227 GN=wge PE=1 SV=1 |
| Q9P281 | BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens OX=9606 GN=BAHCC1 PE=1 SV=4 |
| Q3UHR0 | BAH and coiled-coil domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bahcc1 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005240 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF21744 all species → | BAHCC1-like_Tudor | BAHCC1-like, Tudor domain | Domain | Interproscan |
| PF01426 all species → | BAH | BAH domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR052429 all species → | Family | BAH domain-containing protein | Interproscan |
| IPR048924 all species → | Domain | BAHCC1-like, Tudor domain | Interproscan |
| IPR001025 all species → | Domain | Bromo adjacent homology (BAH) domain | Interproscan |
| IPR043151 all species → | Homologous_superfamily | Bromo adjacent homology (BAH) domain superfamily | Interproscan |
| IPR047419 all species → | Domain | Protein winged eye, Tudor domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12505 all species → | PHD FINGER TRANSCRIPTION FACTOR | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003682 all species → | Molecular Function | chromatin binding | Interproscan |
CAB3980848.1.Transcript abundance of CAB3980848.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
