Gene detail

Detailed information of CAB3981048.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB3981048.1, Leucine-rich repeat and WD repeat-containing 1 [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

Sequence

No sequence record for CAB3981048.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BUI3	Leucine-rich repeat and WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=LRWD1 PE=2 SV=1
B0JZ65	Leucine-rich repeat and WD repeat-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=lrwd1 PE=2 SV=1
Q9UFC0	Leucine-rich repeat and WD repeat-containing protein 1 OS=Homo sapiens OX=9606 GN=LRWD1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005297 (this species only)
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

No Pfam domain signature was detected for CAB3981048.1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR052489 all species →	Family	Leucine-rich repeat and WD repeat-containing protein 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24370 all species →	OPTICIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24733	LRWD1; leucine-rich repeat and WD repeat-containing protein 1	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.