Genomic Location: not available for this species
NR annotation: CAB3981263.1, Hypothetical predicted protein [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3981263.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q86KD0 | BolA-like protein DDB_G0274169 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0274169 PE=3 SV=1 |
| Q56585 | DNA-binding transcriptional regulator BolA OS=Vibrio alginolyticus OX=663 GN=bolA PE=3 SV=1 |
| Q9KPS0 | DNA-binding transcriptional regulator BolA OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=bolA PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001389 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01722 all species → | BolA | BolA-like protein | Family | Interproscan |
| PF10629 all species → | DUF2475 | Protein of unknown function (DUF2475) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002634 all species → | Family | BolA protein | Interproscan |
| IPR036065 all species → | Homologous_superfamily | BolA-like superfamily | Interproscan |
| IPR050961 all species → | Family | BolA/IbaG family stress response and morphology regulators | Interproscan |
| IPR018902 all species → | Domain | Ciliary microtubule inner protein 2A-C-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46229 all species → | BOLA TRANSCRIPTION REGULATOR | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005739 all species → | Cellular Component | mitochondrion | Interproscan |
CAB3981263.1.Transcript abundance of CAB3981263.1 across 21 RNA-seq samples of Paramuricea clavata. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 5 | 20.33 | 32.14 | |
| apical branchlet · Temperature treatment at T0 | 6 | 5 | 11.72 | 24.63 | |
| apical branchlet · Temperature treatment at T25 | 5 | 1 | 0.87 | 4.36 | |
| apical branchlet · Control at T0 | 4 | 1 | 3.85 | 15.39 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
