Genomic Location: not available for this species
NR annotation: CAB3981277.1, histone chaperone ASF1A [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3981277.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q69DB9 | Histone chaperone asf1a-A OS=Xenopus laevis OX=8355 GN=asf1aa PE=1 SV=1 |
| Q2KIG1 | Histone chaperone ASF1A OS=Bos taurus OX=9913 GN=ASF1A PE=2 SV=1 |
| Q9Y294 | Histone chaperone ASF1A OS=Homo sapiens OX=9606 GN=ASF1A PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0007284 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04729 all species → | ASF1_hist_chap | ASF1 like histone chaperone | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006818 all species → | Family | Histone chaperone ASF1-like | Interproscan |
| IPR036747 all species → | Homologous_superfamily | Histone chaperone ASF1-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12040 all species → | ANTI-SILENCING PROTEIN 1 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006325 all species → | Biological Process | chromatin organization | Interproscan |
| GO:0000790 all species → | Cellular Component | chromatin | Interproscan |
| GO:0006335 all species → | Biological Process | DNA replication-dependent chromatin assembly | Interproscan |
| GO:0006336 all species → | Biological Process | chromatin organization | Interproscan |
| GO:0042393 all species → | Molecular Function | histone binding | Interproscan |
CAB3981277.1.Transcript abundance of CAB3981277.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
