Genomic Location: not available for this species
NR annotation: CAB3981432.1, cytochrome b561-like [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3981432.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| A3KPR5 | Lysosomal membrane ascorbate-dependent ferrireductase CYB561A3 OS=Danio rerio OX=7955 GN=cyb561a3a PE=2 SV=1 |
| Q5CZL8 | Plasma membrane ascorbate-dependent reductase CYBRD1 OS=Xenopus tropicalis OX=8364 GN=cybrd1 PE=2 SV=2 |
| Q6DDR3 | Plasma membrane ascorbate-dependent reductase CYBRD1 OS=Xenopus laevis OX=8355 GN=cybrd1 PE=2 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002761 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03188 all species → | Cytochrom_B561 | Eukaryotic cytochrome b561 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR043205 all species → | Family | Cytochrome b561/Cytochrome b reductase 1-like | Interproscan |
| IPR006593 all species → | Domain | Cytochrome b561/ferric reductase transmembrane | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10106 all species → | CYTOCHROME B561-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0016491 all species → | Molecular Function | oxidoreductase activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K08360 | CYB561; transmembrane ascorbate-dependent reductase | EC:7.2.1.3 | Transporters | ko02000 | deepkoala |
Transcript abundance of CAB3981432.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
