Genomic Location: not available for this species
NR annotation: CAB3981478.1, ubiquinone biosynthesis monooxygenase COQ6, mitochondrial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3981478.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q6DF46 | Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial OS=Xenopus tropicalis OX=8364 GN=coq6 PE=2 SV=1 |
| Q68FU7 | Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial OS=Rattus norvegicus OX=10116 GN=Coq6 PE=2 SV=1 |
| Q9Y2Z9 | Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial OS=Homo sapiens OX=9606 GN=COQ6 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003744 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01494 all species → | FAD_binding_3 | FAD binding domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR051205 all species → | Family | Ubiquinone biosynthesis monooxygenase UbiH/COQ6 | Interproscan |
| IPR018168 all species → | Conserved_site | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site | Interproscan |
| IPR002938 all species → | Domain | FAD-binding domain | Interproscan |
| IPR010971 all species → | Family | Ubiquinone biosynthesis hydroxylase UbiH/COQ6 | Interproscan |
| IPR036188 all species → | Homologous_superfamily | FAD/NAD(P)-binding domain superfamily | Interproscan |
| IPR000689 all species → | Family | Ubiquinone biosynthesis monooxygenase COQ6 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43876 all species → | UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005739 all species → | Cellular Component | mitochondrion | Interproscan |
| GO:0006744 all species → | Biological Process | ubiquinone biosynthetic process | Interproscan |
| GO:0016491 all species → | Molecular Function | oxidoreductase activity | Interproscan |
| GO:0016709 all species → | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | Interproscan |
| GO:0071949 all species → | Molecular Function | FAD binding | Interproscan |
| GO:0016705 all species → | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | Interproscan |
| GO:0050660 all species → | Molecular Function | flavin adenine dinucleotide binding | Interproscan |
| GO:0008681 all species → | Molecular Function | 2-octaprenyl-6-methoxyphenol hydroxylase activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K06126 | COQ6; ubiquinone biosynthesis monooxygenase Coq6 | EC:1.14.13.- | Ubiquinone and other terpenoid-quinone biosynthesis | ko00130 | deepkoala |
Transcript abundance of CAB3981478.1 across 21 RNA-seq samples of Paramuricea clavata. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 4 | 13.64 | 34.71 | |
| apical branchlet · Temperature treatment at T0 | 6 | 3 | 11.02 | 46.91 | |
| apical branchlet · Temperature treatment at T25 | 5 | 2 | 0.25 | 0.92 | |
| apical branchlet · Control at T0 | 4 | 2 | 8.81 | 27.79 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
