Genomic Location: not available for this species
NR annotation: CAB3981508.1, histone-lysine N-methyltransferase EHMT1 isoform X2, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3981509.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q9Z148 | Histone-lysine N-methyltransferase EHMT2 OS=Mus musculus OX=10090 GN=Ehmt2 PE=1 SV=2 |
| Q96KQ7 | Histone-lysine N-methyltransferase EHMT2 OS=Homo sapiens OX=9606 GN=EHMT2 PE=1 SV=3 |
| O75762 | Transient receptor potential cation channel subfamily A member 1 OS=Homo sapiens OX=9606 GN=TRPA1 PE=1 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0065032 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF12796 all species → | Ank_2 | Ankyrin repeats (3 copies) | Repeat | Interproscan |
| PF13637 all species → | Ank_4 | Ankyrin repeats (many copies) | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002110 all species → | Repeat | Ankyrin repeat | Interproscan |
| IPR036770 all species → | Homologous_superfamily | Ankyrin repeat-containing domain superfamily | Interproscan |
| IPR043550 all species → | Family | Histone-lysine N-methyltransferase EHMT1/EHMT2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46307 all species → | G9A, ISOFORM B | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0000122 all species → | Biological Process | negative regulation of transcription by RNA polymerase II | Interproscan |
| GO:0000785 all species → | Cellular Component | chromatin | Interproscan |
| GO:0002039 all species → | Molecular Function | p53 binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006306 all species → | Biological Process | obsolete DNA methylation | Interproscan |
| GO:0016279 all species → | Molecular Function | protein-lysine N-methyltransferase activity | Interproscan |
| GO:0018027 all species → | Biological Process | peptidyl-lysine dimethylation | Interproscan |
| GO:0042054 all species → | Molecular Function | histone methyltransferase activity | Interproscan |
| GO:0046974 all species → | Molecular Function | histone H3K9 methyltransferase activity | Interproscan |
| GO:0051570 all species → | Biological Process | obsolete regulation of histone H3-K9 methylation | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K10440 | rbsC; ribose transport system permease protein | - | Transporters | ko02000 | deepkoala |
Transcript abundance of CAB3981509.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
