Genomic Location: not available for this species
NR annotation: CAB3981579.1, fatty acyl- reductase 1-like [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3981579.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q5R834 | Fatty acyl-CoA reductase 1 OS=Pongo abelii OX=9601 GN=FAR1 PE=2 SV=1 |
| Q7ZXF5 | Fatty acyl-CoA reductase 1 OS=Xenopus laevis OX=8355 GN=far1 PE=2 SV=1 |
| Q922J9 | Fatty acyl-CoA reductase 1 OS=Mus musculus OX=10090 GN=Far1 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004233 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF07993 all species → | NAD_binding_4 | Male sterility protein | Family | Interproscan |
| PF03015 all species → | Sterile | Male sterility protein | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR033640 all species → | Domain | Fatty acyl-CoA reductase, C-terminal | Interproscan |
| IPR013120 all species → | Domain | Fatty acyl-coenzyme A reductase, NAD-binding domain | Interproscan |
| IPR036291 all species → | Homologous_superfamily | NAD(P)-binding domain superfamily | Interproscan |
| IPR026055 all species → | Family | Fatty acyl-CoA reductase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11011 all species → | MALE STERILITY PROTEIN 2-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005777 all species → | Cellular Component | peroxisome | Interproscan |
| GO:0035336 all species → | Biological Process | long-chain fatty-acyl-CoA metabolic process | Interproscan |
| GO:0043231 all species → | Cellular Component | intracellular membrane-bounded organelle | Interproscan |
| GO:0080019 all species → | Molecular Function | alcohol-forming very long-chain fatty acyl-CoA reductase activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K11782 | mqnA; chorismate dehydratase | EC:4.2.1.151 | Ubiquinone and other terpenoid-quinone biosynthesis | ko00130 | deepkoala |
Transcript abundance of CAB3981579.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
