Detailed information of CAB3981780.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB3981780.1, A disintegrin and metallo ase with thrombospondin motifs 16-like [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O15072A disintegrin and metalloproteinase with thrombospondin motifs 3 OS=Homo sapiens OX=9606 GN=ADAMTS3 PE=1 SV=4
Q68SA9A disintegrin and metalloproteinase with thrombospondin motifs 7 OS=Mus musculus OX=10090 GN=Adamts7 PE=1 SV=3
Q4VC17A disintegrin and metalloproteinase with thrombospondin motifs 18 OS=Mus musculus OX=10090 GN=Adamts18 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF01421ReprolysinReprolysin (M12B) family zinc metalloprotease DomainInterproscan
PF05986ADAMTS_spacer1ADAM-TS Spacer 1DomainInterproscan
PF19236ADAMTS_CR_3ADAMTS cysteine-rich domainDomainInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan
PF17771ADAMTS_CR_2ADAMTS cysteine-rich domain 2DomainInterproscan
PF19030TSP1_ADAMTSThrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR001590DomainPeptidase M12B, ADAM/reprolysinInterproscan
IPR010294DomainADAMTS/ADAMTS-like, Spacer 1Interproscan
IPR045371DomainADAMTS/ADAMTS-like, cysteine-rich domain 3Interproscan
IPR050439FamilyADAMTS and ADAMTS-likeInterproscan
IPR005821DomainIon transport domainInterproscan
IPR041645DomainADAMTS, cysteine-rich domain 2Interproscan
IPR013273FamilyADAMTS/ADAMTS-likeInterproscan
IPR027359Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13723ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan

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