Genomic Location: not available for this species
NR annotation: CAB3981907.1, voltage-dependent calcium channel subunit alpha-2 delta-1-like isoform X2 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3981907.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q8CFG5 | Voltage-dependent calcium channel subunit alpha-2/delta-3 OS=Rattus norvegicus OX=10116 GN=Cacna2d3 PE=1 SV=1 |
| Q9Z1L5 | Voltage-dependent calcium channel subunit alpha-2/delta-3 OS=Mus musculus OX=10090 GN=Cacna2d3 PE=1 SV=1 |
| Q8IZS8 | Voltage-dependent calcium channel subunit alpha-2/delta-3 OS=Homo sapiens OX=9606 GN=CACNA2D3 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000969 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00092 all species → | VWA | von Willebrand factor type A domain | Domain | Interproscan |
| PF08399 all species → | VWA_N | VWA N-terminal | Family | Interproscan |
| PF08473 all species → | VGCC_alpha2 | Neuronal voltage-dependent calcium channel alpha 2acd | Family | Interproscan |
| PF00046 all species → | Homeodomain | Homeodomain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002035 all species → | Domain | von Willebrand factor, type A | Interproscan |
| IPR017970 all species → | Conserved_site | Homeobox, conserved site | Interproscan |
| IPR001356 all species → | Domain | Homeobox domain | Interproscan |
| IPR013608 all species → | Domain | VWA N-terminal | Interproscan |
| IPR009057 all species → | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| IPR013680 all species → | Domain | Voltage-dependent calcium channel, alpha-2/delta subunit, conserved region | Interproscan |
| IPR051173 all species → | Family | Voltage-dependent calcium channel subunit alpha-2/delta | Interproscan |
| IPR036465 all species → | Homologous_superfamily | von Willebrand factor A-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10166 all species → | VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000981 all species → | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
| GO:0006355 all species → | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0005245 all species → | Molecular Function | voltage-gated calcium channel activity | Interproscan |
| GO:0005891 all species → | Cellular Component | voltage-gated calcium channel complex | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K04860 | CACNA2D3; voltage-dependent calcium channel alpha-2/delta-3 | - | Ion channels | ko04040 | deepkoala |
Transcript abundance of CAB3981907.1 across 21 RNA-seq samples of Paramuricea clavata. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 5 | 20.90 | 45.47 | |
| apical branchlet · Temperature treatment at T0 | 6 | 5 | 17.72 | 75.43 | |
| apical branchlet · Temperature treatment at T25 | 5 | 5 | 6.45 | 10.81 | |
| apical branchlet · Control at T0 | 4 | 2 | 8.74 | 31.26 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
