Genomic Location: pcla8_s000467:44721...49752
NR annotation: CAB3981927.1, Hypothetical predicted protein [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
| CDS |
| PACLA_8A046271 |
| Transcript |
| rna-PACLA_8A046271 |
| Protein |
| CAB3981927.1 |
| UniProt accession | Description |
|---|---|
| B5YAR4 | Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) OX=309799 GN=dnaJ PE=3 SV=1 |
| A4XKA5 | Chaperone protein DnaJ OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 6331) OX=351627 GN=dnaJ PE=3 SV=1 |
| Q56237 | Chaperone protein DnaJ 2 OS=Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) OX=300852 GN=dnaJ2 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0009246 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00226 all species → | DnaJ | DnaJ domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001623 all species → | Domain | DnaJ domain | Interproscan |
| IPR053025 all species → | Family | Mitochondrial ATP Synthase-Associated | Interproscan |
| IPR018253 all species → | Conserved_site | DnaJ domain, conserved site | Interproscan |
| IPR036869 all species → | Homologous_superfamily | Chaperone J-domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR44873 all species → | DNAJ HOMOLOG SUBFAMILY C MEMBER 30, MITOCHONDRIAL | Interproscan |
CAB3981927.1. This gene does have a gene model — the search simply returned no hit.| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K19374 | DNAJC30; DnaJ homolog subfamily C member 30 | - | Chaperones and folding catalysts | ko03110 | deepkoala |
Transcript abundance of CAB3981927.1 across 21 RNA-seq samples of Paramuricea clavata. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 5 | 2.05 | 5.93 | |
| apical branchlet · Temperature treatment at T0 | 6 | 5 | 1.92 | 6.44 | |
| apical branchlet · Temperature treatment at T25 | 5 | 4 | 7.47 | 26.25 | |
| apical branchlet · Control at T0 | 4 | 2 | 1.85 | 6.37 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
