Genomic Location: :...
NR annotation: CAB3982064.1, PIN domain [Paramuricea clavata]
| CDS | |||||
| Transcript |
| Protein |
| Uniprot term | Description |
|---|---|
| Q9W6K2 | Exonuclease 1 OS=Xenopus laevis OX=8355 GN=exo1 PE=2 SV=1 |
| Q803U7 | Exonuclease 1 OS=Danio rerio OX=7955 GN=exo1 PE=2 SV=1 |
| Q9QZ11 | Exonuclease 1 OS=Mus musculus OX=10090 GN=Exo1 PE=2 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08797 | HIRAN | HIRAN domain | Domain | Interproscan |
| PF00867 | XPG_I | XPG I-region | Family | Interproscan |
| PF00752 | XPG_N | XPG N-terminal domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR014905 | Domain | HIRAN domain | Interproscan |
| IPR006085 | Domain | XPG, N-terminal | Interproscan |
| IPR029060 | Homologous_superfamily | PIN-like domain superfamily | Interproscan |
| IPR006084 | Family | XPG/Rad2 endonuclease | Interproscan |
| IPR008918 | Conserved_site | Helix-hairpin-helix motif, class 2 | Interproscan |
| IPR036279 | Homologous_superfamily | 5'-3' exonuclease, C-terminal domain superfamily | Interproscan |
| IPR044752 | Domain | Exonuclease 1-like, PIN-like domain | Interproscan |
| IPR006086 | Domain | XPG-I domain | Interproscan |
| IPR019974 | Conserved_site | XPG conserved site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11081 | FLAP ENDONUCLEASE FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0016818 | Molecular Function | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | Interproscan |
| GO:0004518 | Molecular Function | nuclease activity | Interproscan |
| GO:0000729 | Biological Process | DNA double-strand break processing | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006298 | Biological Process | mismatch repair | Interproscan |
| GO:0006310 | Biological Process | DNA recombination | Interproscan |
| GO:0017108 | Molecular Function | 5'-flap endonuclease activity | Interproscan |
| GO:0035312 | Molecular Function | 5'-3' DNA exonuclease activity | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| GO:0016788 | Molecular Function | hydrolase activity, acting on ester bonds | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K10746 | EXO1; exonuclease 1 | EC:3.1.-.- | DNA repair and recombination proteins | ko03400 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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