Detailed information of CAB3982169.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB3982169.1, Upstream activation factor subunit spp27 [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

 Sequence
No sequence record for CAB3982169.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q05024Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008521 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02201
all species →		SWIBSWIB/MDM2 domainDomainInterproscan
PF08766
all species →		DEK_CDEK C terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003121
all species →		DomainSWIB/MDM2 domainInterproscan
IPR019835
all species →		DomainSWIB domainInterproscan
IPR014876
all species →		DomainDEK, C-terminalInterproscan
IPR036885
all species →		Homologous_superfamilySWIB/MDM2 domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13844
all species →		SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY DInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K15223UAF30, SPP27; upstream activation factor subunit UAF30-Transcription machineryko03021deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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