Genomic Location: not available for this species
NR annotation: CAB3982233.1, 60 kDa lysophospholipase isoform X2 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3982233.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q9U518 | L-asparaginase OS=Dirofilaria immitis OX=6287 PE=1 SV=1 |
| O88202 | 60 kDa lysophospholipase OS=Rattus norvegicus OX=10116 GN=Aspg PE=1 SV=1 |
| A0JNU3 | 60 kDa lysophospholipase OS=Mus musculus OX=10090 GN=Aspg PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001848 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF17763 all species → | Asparaginase_C | Glutaminase/Asparaginase C-terminal domain | Domain | Interproscan |
| PF01336 all species → | tRNA_anti-codon | OB-fold nucleic acid binding domain | Domain | Interproscan |
| PF00710 all species → | Asparaginase | Asparaginase, N-terminal | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR012340 all species → | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| IPR036152 all species → | Homologous_superfamily | Asparaginase/glutaminase-like superfamily | Interproscan |
| IPR020827 all species → | Active_site | Asparaginase/glutaminase, active site 1 | Interproscan |
| IPR006034 all species → | Family | Asparaginase/glutaminase-like | Interproscan |
| IPR040919 all species → | Domain | Asparaginase/glutaminase, C-terminal | Interproscan |
| IPR004365 all species → | Domain | OB-fold nucleic acid binding domain, AA-tRNA synthetase-type | Interproscan |
| IPR006033 all species → | Family | Type I L-asparaginase family | Interproscan |
| IPR041725 all species → | Family | Type I (cytosolic) L-asparaginase | Interproscan |
| IPR027474 all species → | Domain | L-asparaginase, N-terminal | Interproscan |
| IPR037152 all species → | Homologous_superfamily | L-asparaginase, N-terminal domain superfamily | Interproscan |
| IPR027473 all species → | Homologous_superfamily | L-asparaginase, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11707 all species → | L-ASPARAGINASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0006520 all species → | Biological Process | amino acid metabolic process | Interproscan |
| GO:0004067 all species → | Molecular Function | asparaginase activity | Interproscan |
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K13278 | ASPG; 60kDa lysophospholipase | EC:3.1.1.5 EC:3.1.1.47 EC:3.5.1.1 | Enzymes with EC numbers | - | deepkoala |
Transcript abundance of CAB3982233.1 across 21 RNA-seq samples of Paramuricea clavata. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 5 | 7.05 | 12.19 | |
| apical branchlet · Temperature treatment at T0 | 6 | 5 | 12.67 | 33.26 | |
| apical branchlet · Temperature treatment at T25 | 5 | 3 | 2.29 | 6.03 | |
| apical branchlet · Control at T0 | 4 | 3 | 18.23 | 39.07 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
