Gene detail

Detailed information of CAB3982266.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB3982266.1, zinc finger CCHC domain-containing 3-like [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
O88322	Nidogen-2 OS=Mus musculus OX=10090 GN=Nid2 PE=1 SV=2
B5DFC9	Nidogen-2 OS=Rattus norvegicus OX=10116 GN=Nid2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00098	zf-CCHC	Zinc knuckle	Domain	Interproscan
PF07645	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR049883	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR042509	Family	Zinc finger CCHC domain-containing protein 3	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR009017	Homologous_superfamily	Green fluorescent protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22639	GAG-RELATED PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0002218	Biological Process	activation of innate immune response	Interproscan
GO:0003690	Molecular Function	double-stranded DNA binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan