Gene detail

Detailed information of CAB3982428.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB3982428.1, collagen alpha-2(V) chain [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A8TX70	Collagen alpha-5(VI) chain OS=Homo sapiens OX=9606 GN=COL6A5 PE=1 SV=1
O35701	Matrilin-3 OS=Mus musculus OX=10090 GN=Matn3 PE=1 SV=2
Q62935	von Willebrand factor (Fragment) OS=Rattus norvegicus OX=10116 GN=Vwf PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00092	VWA	von Willebrand factor type A domain	Domain	Interproscan
PF00095	WAP	WAP-type (Whey Acidic Protein) 'four-disulfide core'	Domain	Interproscan
PF01391	Collagen	Collagen triple helix repeat (20 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036465	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR050149	Family	Collagen superfamily	Interproscan
IPR008197	Domain	WAP-type 'four-disulfide core' domain	Interproscan
IPR002035	Domain	von Willebrand factor, type A	Interproscan
IPR008160	Repeat	Collagen triple helix repeat	Interproscan
IPR036645	Homologous_superfamily	Elafin-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24023	COLLAGEN ALPHA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0030414	Molecular Function	peptidase inhibitor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06238	COL6A; collagen type VI alpha	-	Glycosaminoglycan binding proteins	ko00536	deepkoala