Genomic Location: not available for this species
NR annotation: CAB3982441.1, formimidoyltransferase-cyclodeaminase [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB3982442.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| O88618 | Formimidoyltransferase-cyclodeaminase OS=Rattus norvegicus OX=10116 GN=Ftcd PE=1 SV=4 |
| Q91XD4 | Formimidoyltransferase-cyclodeaminase OS=Mus musculus OX=10090 GN=Ftcd PE=1 SV=1 |
| O95954 | Formimidoyltransferase-cyclodeaminase OS=Homo sapiens OX=9606 GN=FTCD PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006121 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02971 all species → | FTCD | Formiminotransferase domain | Domain | Interproscan |
| PF07837 all species → | FTCD_N | Formiminotransferase domain, N-terminal subdomain | Domain | Interproscan |
| PF04961 all species → | FTCD_C | Formiminotransferase-cyclodeaminase | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013802 all species → | Domain | Formiminotransferase, C-terminal subdomain | Interproscan |
| IPR004227 all species → | Domain | Formiminotransferase catalytic domain | Interproscan |
| IPR036178 all species → | Homologous_superfamily | Formimidoyltransferase-cyclodeaminase-like superfamily | Interproscan |
| IPR022384 all species → | Homologous_superfamily | Formiminotransferase catalytic domain superfamily | Interproscan |
| IPR012886 all species → | Domain | Formiminotransferase, N-terminal subdomain | Interproscan |
| IPR037070 all species → | Homologous_superfamily | Formiminotransferase, C-terminal subdomain superfamily | Interproscan |
| IPR007044 all species → | Domain | Cyclodeaminase/cyclohydrolase | Interproscan |
| IPR051623 all species → | Family | Formiminotransferase-cyclodeaminase | Interproscan |
| IPR037064 all species → | Homologous_superfamily | Formiminotransferase, N-terminal subdomain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12234 all species → | FORMIMINOTRANSFERASE-CYCLODEAMINASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005542 all species → | Molecular Function | folic acid binding | Interproscan |
| GO:0016740 all species → | Molecular Function | transferase activity | Interproscan |
| GO:0003824 all species → | Molecular Function | catalytic activity | Interproscan |
| GO:0044237 all species → | Biological Process | obsolete cellular metabolic process | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K13990 | FTCD; glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase | EC:2.1.2.5 EC:4.3.1.4 | Exosome | ko04147 | deepkoala |
Transcript abundance of CAB3982442.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
