Gene detail

Detailed information of CAB3983068.1 in Paramuricea clavata

Genomic Location: pcla8_s000595:17639...20973
NR annotation: CAB3983068.1, phosphatase 1 regulatory subunit 3B-like [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-PACLA_8A059286

CAATTCCCCGCCCACCCCCCGGTTCTGTGAtataaacaaacatggcgcTTTCATTTTGCCAAAGTGAAAAACATTGAAGAATAGTTTCTCTGCAATCATGTGAGGTCCAGGAGCTTCGACACTTAAAGCAGAGGTAAGGTAAAAGAATATACCGCCTTAAGACTGTGTAGTTTTGTACTTCGAATGGCTGATATTGTACTTTTTCTtaggaaaaaattcaaaaaatctGCATGTGTATAATTAACAAATTACATAAATAACTCTTTATATTCATTGAATATTAACTAGCTAATATGTCTTCTGTGGCTAATTTTTCCTTCGTGCCTTCCCGCATGTTTCAGGTGAAACCCTCTGGTTATTACTTAAGTCAATTCTATTAATTCAATGTCGTTGGTTGGTCGGAAGGCAGGCGAGAAGTTTTGGGGTTTTTTATGTTTATACGCCTTTGGAAGGCTGTTGCCATTAAATTGGTTTATATCGTAAACATCGGAAATGGAATATAACAAGGACAGTCATAAAACTATCCTTAAAAAGCAAAAATCGTTGCCTCTGACAAAGAGTAAGAATGTACACTTCGCTGATGTATGTGGTCTTAGTCTTGTGTCGGTGCATAAAATCTCCATGGACGATCTAACTGTGCCCTCGAATTCAGATCTGAAAAACGAGATTACGAAAGAGCTAATCCTTGCATTTGCACAGCCGATTGCATTGGGTAATTTTGTAGAGCGTTTGAAAAGGCTTAGCGTCTCGTTGGAAAATGTATTGGTGTCAAATTGTGCTATAATGGGCACGATAAAAGTTCGAAACATTGCCTATGAAAAAAATGTATTCGTTCGATGTACTTTTGATagctggaaaacctttgaagatAGTAACGGCAGTTACGTACCATTGTCATATGATGGTAACTACGATCGTTTCTCGTTCGCGCTGACGGTACCAAGCACCATCAAGCATGGTGATAAAGTCGAGTTTGCAATATGCTACAAAACGGTCTCACCTGACAATGAACTCTGGGATAACAATGACGGCAAGAATTATGTTATTGAATGTAAAGAGAAATGCATGGCCAGGAATCCTTCCTATAGCTTGCTGTGGAACCATGTTATACCCAATTATAGAAGATAACGGTTCTTCCAAGATTAATAATGAGGCAATTAgaccaaataaaaaaatacttggttaccGTCATTGCCTGCCTGTCTATTTTTGGCACCTCTGAAAtctttttatgtaaatctctttgTTGAAACAAggttcttatatcaaaatggcagccttcgcaacatcagtacaaaaaatatcaccgatataGTGGAAAAACCACCCTCTTCCCCccaaaaaatactattaaaaaatttaaaaaatgagtaaaaatttttaaaaaaagccctcccagctctgaaaatttgtgaaagTGTGatgctaaccaagtattttttttatttggtctTACATTAGAAAGTATAGCTAGTAGAACATCCAAAGGGGATGTAAACTATCGGAAAGAGCTGTGACCAAAATAATGCAGATTAAATAGCCATTATACTGGCAATGAAAATATTTAGGGAAAACATTGCAAGGCAATTGGCAAATAACAGGTTAACCATAGACAGATTTTGCTCTGGGGGTGTTGCaaattcaggggggggggggagatgaGCGTGGGGCATGTAGTGCTGTCAAGCAAGTTACAGCAGATATCTGGGGGCACAGTTGCTAGTGGGGTAAGAGGGTGATTTTTATCTTAGTTCAAAATCCTTGTTTCTATCATACTGCTGTCATTTAACCCAACAAGCATATAAATTTCTAGGGGGGTGCAAATTGTTGTGTGGCAGGAAAACTGTCTAGGAAGGTGCAATATATTTTGGGGGTGCACCCCCAGAAAATATGTCTGCGAGGTTAATAAATTTCTTGGTTGTAAAATAGTCGGGATACAATacgtgttaaatatttttttactgaCAATATGAATTTATATAAATGTATGTGCGTTTACATTAAATTGTGAGATATAGCTAATTCTAATAAAGCTACATACAGTACTTATACAGTTAACTTTCAAAGGTATATAACTTTAGATATTTAATTTCAATAATTTAATATTGTTTAATAATTAGGAATATGTGCCAACAATGCTTTACTATTACCCATTTTTCATCGATCATTCACGATTAAATCCTTAGGCTCAGTTTCACGGACTGGACTACAGCATGCTTCCCCTACCAGCGGGGTGCATGCTGTAGGCTTGCTCCTTGTAGCCTGCCGAGGACAGGACTTGACTGAGCCTCATTTTCTGATTCAATTATTATGATCAACGAGCAGGGCGACATAGCCAGAAGAATTGATTGACCGACATATAGTgccaatttttttattgttaaaagcaTTGCCAATAAAGGCAATATTCACAGGGAAAAAATTTAACTTTCGATTAATGGGTTTTTGAATGTAAAAAATGAACTCTTAtcattattggttattatagatttcccgtatggtaaattagtaaaaaccatGTTGTTTAATATTACCATATTAATGGTACTTTATTAGGAAAATACCATTAATTAATACCAAATGGGAAatctataataaccaataatggtaAGGGTTTTTACATTGATAGTATACATGGTAAACCATTACAAAACCCATTAAtggaatttaaatttttttcttgggatttaatttttttcttggattgtatttgtaatttgtTTAAGAACTTGTTAATAATTATTAGATAAACGGTGTTTGCCGTGTCGAACGTTGCATTGTGGTCAACCATCAAATTGGCGTGATGCCCCTCTTTCCACAACAGCATTTCCACCCAACTTTGTTAtccatttatttcattttttctttGTCCACTTCAAATCATCTGTCCTAGGTTCATACCCAGTCAGTTTTGTAATGCACCATTCTATTGTCGGCCAAAACCCAATCACCTCGAGAGGATAATTTAACCAACCTGTAGTTATACAGAAGTAAGTCTCGTGCGGCGCCACGTGATGGATACGGTGATGAGTCCTCGGTAGAATAATCTTGTAGTCTTGTAAGAACATCACCCATCGAGGCAACCCAAAGTATGTATGTGACCATTTGTGAATCTGATTAGTCAATGCGACAAAGATTgctaatgcaaatatataccaGTCCCAAGCACAACAGTCGCGCAGTGTGACTCTGTCGAAGGTTAAGTGCTTATAAACTACATAGGATAACGTTGGTAAAGTTATTAGACAGTTATCTCCATTAGTTTCAATGATATCGTGTCGTGTAAGAGCAGTCGGGTCCACGTGGTGCTCACGAAATGGCCTGATAAATGCCTG

Protein

Uniprot

Uniprot term	Description
Q6GQ68	Protein phosphatase 1 regulatory subunit 3B-B OS=Xenopus laevis OX=8355 GN=ppp1r3b-b PE=2 SV=1
Q803M0	Protein phosphatase 1 regulatory subunit 3B OS=Danio rerio OX=7955 GN=ppp1r3b PE=2 SV=1
Q6P950	Protein phosphatase 1 regulatory subunit 3C-B OS=Danio rerio OX=7955 GN=ppp1r3cb PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03370	CBM_21	Carbohydrate/starch-binding module (family 21)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050782	Family	Protein phosphatase 1 regulatory subunit 3	Interproscan
IPR038175	Homologous_superfamily	CBM21 domain superfamily	Interproscan
IPR005036	Domain	CBM21 (carbohydrate binding type-21) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12307	PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000164	Cellular Component	protein phosphatase type 1 complex	Interproscan
GO:0005979	Biological Process	regulation of glycogen biosynthetic process	Interproscan
GO:0008157	Molecular Function	protein phosphatase 1 binding	Interproscan
GO:2001069	Molecular Function	glycogen binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07189	PPP1R3; protein phosphatase 1 regulatory subunit 3A/B/C/D/E	-	Protein phosphatases and associated proteins	ko01009	deepkoala